Factsheet for Solyc02g087850.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003335	Potato	cytosol	98.57	98.57
CDY00113	Canola	cytosol	21.0	66.17
Bra033062.1-P	Field mustard	cytosol	45.82	56.97
CDY04039	Canola	cytosol	45.82	56.97
CDY70277	Canola	cytosol	45.58	56.68
CDY30281	Canola	cytosol	52.03	56.48
CDY67051	Canola	cytosol	49.88	55.15
Solyc02g067400.1.1	Tomato	cytosol	36.99	54.58
Bra025638.1-P	Field mustard	cytosol	52.03	53.17
AT3G28850.1	Thale cress	cytosol	54.18	53.04
CDY20015	Canola	cytosol	50.84	52.72
CDX85224	Canola	cytosol	52.03	52.66
Bra039044.1-P	Field mustard	cytosol	52.98	52.61
CDX86410	Canola	cytosol	51.55	52.55
Bra025357.1-P	Field mustard	cytosol	51.55	52.55
KRH40113	Soybean	cytosol, mitochondrion	57.28	52.4
KRH01158	Soybean	cytosol	58.0	52.37
AT5G39865.1	Thale cress	cytosol, mitochondrion	46.3	49.74
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	53.22	49.56
Zm00001d026424_P001	Maize	cytosol	14.08	47.2
KRG93517	Soybean	cytosol	48.45	46.45
GSMUA_Achr3P01620_001	Banana	mitochondrion	36.28	43.06
Zm00001d027853_P001	Maize	plastid	31.74	40.8
TraesCS4A01G016500.1	Wheat	mitochondrion	31.74	40.3
TraesCS4D01G286300.1	Wheat	mitochondrion	31.26	40.18
HORVU4Hr1G075190.2	Barley	mitochondrion	31.26	40.06
GSMUA_Achr4P00540_001	Banana	mitochondrion	37.47	39.95
EER95421	Sorghum	mitochondrion, plastid	31.98	39.88
TraesCS4B01G287700.1	Wheat	mitochondrion	31.03	39.63
Solyc11g005270.1.1	Tomato	cytosol	17.9	39.47
GSMUA_Achr8P24180_001	Banana	cytosol	32.7	39.26
Os03t0170800-00	Rice	mitochondrion	29.83	38.82
EES05526	Sorghum	mitochondrion	32.94	36.32
Os02t0748800-00	Rice	cytosol, mitochondrion	31.98	36.31
Zm00001d052252_P001	Maize	mitochondrion	31.74	36.14
HORVU0Hr1G017160.1	Barley	mitochondrion	32.46	35.79
TraesCS6D01G285000.1	Wheat	mitochondrion	32.22	35.71
TraesCS6B01G334000.1	Wheat	mitochondrion	32.46	35.6
TraesCS6A01G305800.1	Wheat	mitochondrion	32.7	35.58
Zm00001d018058_P001	Maize	plastid	31.5	35.01
Solyc06g082180.1.1	Tomato	cytosol, plastid	21.0	34.65
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	33.17	34.41
Zm00001d002123_P001	Maize	plastid	33.89	33.49
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	21.72	33.46
Solyc03g078380.1.1	Tomato	cytosol	20.53	32.95
Solyc08g083270.1.1	Tomato	cytosol	24.82	31.8
Os06t0226100-00	Rice	plastid	28.64	31.33
Os04t0641300-01	Rice	cytosol, plastid	32.7	30.93
TraesCS2B01G551200.1	Wheat	cytosol, plastid	33.41	30.57
TraesCS2A01G521700.1	Wheat	plastid	33.41	30.57
TraesCS2D01G523500.1	Wheat	plastid	33.17	30.35
HORVU7Hr1G038000.2	Barley	cytosol, plastid	30.55	30.26
Zm00001d037218_P001	Maize	plastid	30.31	29.67
HORVU2Hr1G115200.2	Barley	cytosol	32.46	29.5
OQU82428	Sorghum	cytosol, plastid	34.61	29.18
Zm00001d044841_P001	Maize	plastid	30.31	29.06
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	31.5	29.01
TraesCS7B01G090200.1	Wheat	cytosol, plastid	31.5	28.27
EER88108	Sorghum	plastid	30.31	27.85
Zm00001d024469_P001	Maize	cytosol, plastid	24.34	27.79
Solyc10g079560.1.1	Tomato	plastid	28.4	27.42
TraesCS3D01G334100.1	Wheat	plastid	26.73	27.32
TraesCS3B01G372200.1	Wheat	plastid	26.49	27.01
EES14625	Sorghum	cytosol, plastid	25.54	26.42
TraesCS3A01G340600.1	Wheat	plastid	25.78	26.34
Solyc09g009860.1.1	Tomato	cytosol	25.06	26.32
TraesCS7D01G186600.1	Wheat	plastid	31.26	26.04
Solyc08g082590.2.1	Tomato	cytosol	23.87	25.45
Solyc11g006430.1.1	Tomato	cytosol	21.0	24.38
Os08t0171333-00	Rice	plastid	17.18	22.78
Solyc06g082170.2.1	Tomato	cytosol, plastid	19.81	20.0

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109
UniProt:K4BBU1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	SUPFAM:SSF52833
EnsemblPlantsGene:Solyc02g087850.1	EnsemblPlants:Solyc02g087850.1.1	InterPro:Thioredoxin-like_sf	UniParc:UPI00027682E8	SEG:seg	:

Description

No Description!

Coordinates

chr2:+:50115351..50116610

Molecular Weight (calculated)

46871.0 Da

IEP (calculated)

4.503

GRAVY (calculated)

-0.628

Length

419 amino acids

Sequence
(BLAST)

001: MGCATSKPKV CHKCRAPCSP VRRSYSMHDD GYHRVALTSS TLGSLKLDPM NQSQSIKDGD TSSFDLCDFD EVKSCKEEFA MGLIEAKTWS EMINEKIPKV
101: VPKTPVRTPP GEPETINTWE LMEGLEDSSP LKPAHHVRSF SFHVSPNPVS SQYDLPTPRV KDHIEGSPKP LWEEVAEDET NSSSNDTSIV SEFDSEVIST
201: FRKALEDLPP ANPFHLKPLI TENQKPVADE EDPLEITDVK KVTEYKVSKD KLVVYFTSLR GVRKTYEDCG HVRVILKGLG VKIDERDVSM HSGFKEELKE
301: LLGNEYSGGG LPRIFMGGKY IGGADEIRRM NEDGKLEKFV ENCERIEDGG VIGGCNCEAC GDIRFVPCET CSGSCKIYYG ADYEEDNEDE EELEEDEYGF
401: QRCPDCNENG LIRCPICCD

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.