Factsheet for Zm00001d044841_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037218_P001	Maize	plastid	71.4	72.9
Os06t0226100-00	Rice	plastid	51.49	58.75
Zm00001d026424_P001	Maize	cytosol	16.25	56.8
Zm00001d052252_P001	Maize	mitochondrion	46.45	55.16
Zm00001d018058_P001	Maize	plastid	47.14	54.64
HORVU7Hr1G038000.2	Barley	cytosol, plastid	51.95	53.66
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	52.17	50.11
TraesCS7B01G090200.1	Wheat	cytosol, plastid	52.17	48.82
TraesCS7D01G186600.1	Wheat	plastid	52.4	45.53
CDY00113	Canola	cytosol	13.73	45.11
Zm00001d012471_P001	Maize	cytosol, plastid	11.67	44.35
Zm00001d027853_P001	Maize	plastid	32.95	44.17
Zm00001d029202_P001	Maize	cytosol	19.45	42.93
Zm00001d022403_P001	Maize	cytosol, plastid	19.22	41.38
Zm00001d002123_P001	Maize	plastid	38.67	39.86
Zm00001d024469_P001	Maize	cytosol, plastid	31.81	37.87
Zm00001d007885_P001	Maize	mitochondrion	18.76	36.61
Zm00001d010594_P001	Maize	plastid	20.59	36.14
Zm00001d012904_P001	Maize	cytosol	9.84	34.68
PGSC0003DMT400017853	Potato	cytosol	25.63	34.67
CDY04039	Canola	cytosol	26.54	34.42
Zm00001d010509_P001	Maize	mitochondrion	19.22	34.01
Zm00001d038018_P001	Maize	mitochondrion	18.54	33.89
Bra033062.1-P	Field mustard	cytosol	26.09	33.83
CDY70277	Canola	cytosol	26.09	33.83
Zm00001d038445_P001	Maize	cytosol	20.82	32.85
Zm00001d054094_P001	Maize	cytosol	23.34	32.69
CDY67051	Canola	cytosol	27.69	31.93
Zm00001d018827_P001	Maize	mitochondrion	19.45	31.6
AT5G39865.1	Thale cress	cytosol, mitochondrion	28.15	31.54
CDY30281	Canola	cytosol	27.69	31.35
PGSC0003DMT400056766	Potato	cytosol	27.92	30.73
PGSC0003DMT400003335	Potato	cytosol	29.29	30.55
Zm00001d043006_P001	Maize	plastid	20.14	30.45
Solyc02g087850.1.1	Tomato	cytosol, plastid	29.06	30.31
Solyc02g067400.1.1	Tomato	cytosol	19.68	30.28
Bra025638.1-P	Field mustard	cytosol	28.38	30.24
CDX86410	Canola	cytosol	28.15	29.93
Bra025357.1-P	Field mustard	cytosol	28.15	29.93
AT3G28850.1	Thale cress	cytosol	29.06	29.67
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	30.43	29.56
CDX85224	Canola	cytosol	27.92	29.47
CDY20015	Canola	cytosol	27.23	29.46
Bra039044.1-P	Field mustard	cytosol	28.15	29.15
KRH40113	Soybean	cytosol, mitochondrion	30.43	29.04
Zm00001d033205_P001	Maize	mitochondrion	22.43	28.32
KRH01158	Soybean	cytosol	29.98	28.23
KRG93517	Soybean	cytosol	27.46	27.46
Zm00001d013668_P001	Maize	mitochondrion	21.74	27.14
Zm00001d003779_P001	Maize	cytosol	24.03	23.49
Zm00001d039270_P001	Maize	cytosol	20.37	22.42

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A1D6NRT9	ProteinID:AQL00999.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF91
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000182BF3B	EnsemblPlantsGene:Zm00001d044841	EnsemblPlants:Zm00001d044841_P001	EnsemblPlants:Zm00001d044841_T001
SEG:seg	:	:	:	:	:

Description

Glutaredoxin family protein

Coordinates

chr9:-:4900567..4901880

Molecular Weight (calculated)

44832.6 Da

IEP (calculated)

7.011

GRAVY (calculated)

-0.408

Length

437 amino acids

Sequence
(BLAST)

001: MGCKGSKHAL HGATGLPARA PEPQSRSGRW APPRHSVALR SSTLGTLSLD RAAAAVAAAG LSFDAAGRGA GGGDESGTMT KAGGSDGVDG GAGTKLLGPS
101: LGGWRPKRVE APRRAVAPRT PSKTPGRDPE EINVWELMEG LDDDDEEDEA TDDNVRGVGD GDGVERKAQS APGSPAHPVL DPDLLDAFRK ALDDLTATPA
201: GSPSPLPGSA AKRNGGGGGG DVETRGIPTF PGIVRARVDV FQEKINARSR TRTKLARKAS PPAPAPDSAG RVVVYLTSLR GVRQTYEDCW STSALLRGYG
301: VRADERDLSM HAGFKDELRA ALALGDGGRL PPLPQVFVDG RRLGGAEEVR RLHEAGELGA ALGVCDAAPC TAAAKGGAGA QDACAACGGV RFVPCDGCSG
401: SCKVFVEDED DACASRGGAF RRCPKCNENG LVKCVVC

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.