Factsheet for Zm00001d013668_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91159	Sorghum	mitochondrion	84.0	82.58
Zm00001d033205_P001	Maize	mitochondrion	78.57	79.48
Os03t0648800-00	Rice	mitochondrion	65.43	70.68
TraesCS5B01G374300.1	Wheat	mitochondrion	62.57	69.52
TraesCS5D01G381700.1	Wheat	mitochondrion	62.29	67.7
TraesCS5A01G372200.1	Wheat	mitochondrion	61.43	65.35
HORVU5Hr1G092580.1	Barley	cytosol	35.71	51.65
VIT_08s0032g01030.t01	Wine grape	cytosol	23.43	44.81
Zm00001d007885_P001	Maize	mitochondrion	28.57	44.64
Zm00001d012471_P001	Maize	cytosol, plastid	14.0	42.61
Zm00001d022403_P001	Maize	cytosol, plastid	24.0	41.38
Zm00001d029202_P001	Maize	cytosol	23.14	40.91
Zm00001d012904_P001	Maize	cytosol	14.29	40.32
Zm00001d018827_P001	Maize	mitochondrion	29.14	37.92
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	31.71	37.12
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	25.43	36.48
CDX98926	Canola	cytosol	24.86	36.25
CDY67834	Canola	cytosol	24.86	35.95
Bra009197.1-P	Field mustard	cytosol	24.86	35.95
Zm00001d038018_P001	Maize	mitochondrion	24.29	35.56
AT5G06470.1	Thale cress	cytosol, mitochondrion	24.29	35.56
Zm00001d010509_P001	Maize	mitochondrion	24.86	35.22
Bra005898.1-P	Field mustard	cytosol, mitochondrion	24.86	35.22
Zm00001d026424_P001	Maize	cytosol	12.57	35.2
KRH72143	Soybean	mitochondrion	25.43	33.71
KRG96283	Soybean	mitochondrion	23.71	32.68
KRH32876	Soybean	cytosol	25.14	31.88
Solyc11g006430.1.1	Tomato	cytosol	32.86	31.86
KRH68025	Soybean	cytosol	24.0	31.82
CDX81007	Canola	cytosol, mitochondrion	20.0	31.53
Zm00001d010594_P001	Maize	plastid	22.29	31.33
CDY55763	Canola	cytosol, mitochondrion	19.71	31.08
PGSC0003DMT400005022	Potato	cytosol	32.57	31.06
KRH34627	Soybean	cytosol	32.0	30.35
VIT_13s0073g00520.t01	Wine grape	cytosol	32.57	30.32
KRG92161	Soybean	cytosol	32.29	29.74
Zm00001d038445_P001	Maize	cytosol	23.14	29.24
Zm00001d054094_P001	Maize	cytosol	26.0	29.17
Zm00001d043006_P001	Maize	plastid	24.0	29.07
CDY04838	Canola	mitochondrion	29.14	28.49
Bra028902.1-P	Field mustard	mitochondrion	29.14	28.49
AT3G11773.2	Thale cress	cytosol	15.71	27.5
Zm00001d027853_P001	Maize	plastid	24.29	26.07
AT5G01420.1	Thale cress	cytosol	29.43	25.69
Zm00001d052252_P001	Maize	mitochondrion	26.86	25.54
Zm00001d018058_P001	Maize	plastid	27.14	25.2
Zm00001d039270_P001	Maize	cytosol	28.57	25.19
Zm00001d024469_P001	Maize	cytosol, plastid	26.29	25.07
Zm00001d002123_P001	Maize	plastid	28.57	23.58
Zm00001d003779_P001	Maize	cytosol	30.0	23.49
Zm00001d044841_P001	Maize	plastid	27.14	21.74
Zm00001d037218_P001	Maize	plastid	26.29	21.5

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	UniProt:A0A1D6GLD9	ProteinID:AQK64130.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF195	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00084492A9	EnsemblPlantsGene:Zm00001d013668	EnsemblPlants:Zm00001d013668_P001
EnsemblPlants:Zm00001d013668_T001	SEG:seg	:	:	:	:

Description

Electron transporter/ thiol-disulfide exchange intermediate

Coordinates

chr5:+:16899731..16900783

Molecular Weight (calculated)

36642.5 Da

IEP (calculated)

8.008

GRAVY (calculated)

-0.353

Length

350 amino acids

Sequence
(BLAST)

001: MGGLRSRILR TLQSFPTAAP AQSPNLLLAP LPPGAGPSPQ PPAAPCVRLQ EPAPQEPPLG DEARAAPGGG GDDDKENVSP GATPRKAKKM KLSSYHHDRS
101: PGLGEEQRAD GATRYRRPDL ASATLFDPDL LAAFRRAVDA YAQALDAARR RDVDVDVDDG DGVPGGGGGG GGGGPGVTDP LDAFERRCPP GGERAVVLYT
201: TSIRGVRRTF EDCARVRRLL GGLRVAFLER DVSMHAPYRE ELRALLRCGR GEGGGGAFPV PPRLFVDGRY LGGADEVVAL HERSQLRPVL WRAARRGAAE
301: VPCAVCGGAW FVVCGACGGS HWLHDASAGA GRVPCSACNE NGLVPCPLCS

Best Arabidopsis Sequence Match ( AT5G01420.1 )
(BLAST)

001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.