CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033205_P001	Maize	mitochondrion	82.87	85.26
Zm00001d013668_P001	Maize	mitochondrion	82.58	84.0
Os03t0648800-00	Rice	mitochondrion	65.17	71.6
TraesCS5B01G374300.1	Wheat	mitochondrion	61.8	69.84
TraesCS5D01G381700.1	Wheat	mitochondrion	62.36	68.94
TraesCS5A01G372200.1	Wheat	mitochondrion	61.24	66.26
HORVU5Hr1G092580.1	Barley	cytosol	34.27	50.41
VIT_08s0032g01030.t01	Wine grape	cytosol	23.31	45.36
EER95886	Sorghum	mitochondrion	30.9	40.15
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	31.46	37.46
CDX98926	Canola	cytosol	24.44	36.25
KXG36862	Sorghum	cytosol	21.63	36.15
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	24.72	36.07
CDY67834	Canola	cytosol	24.44	35.95
Bra009197.1-P	Field mustard	cytosol	24.44	35.95
AT5G06470.1	Thale cress	cytosol, mitochondrion	23.88	35.56
EER94843	Sorghum	cytosol	20.22	35.47
Bra005898.1-P	Field mustard	cytosol, mitochondrion	24.44	35.22
EES18035	Sorghum	mitochondrion	23.6	35.0
KRH72143	Soybean	mitochondrion	25.0	33.71
VIT_13s0073g00520.t01	Wine grape	cytosol	34.83	32.98
Solyc11g006430.1.1	Tomato	cytosol	33.15	32.69
KRG96283	Soybean	mitochondrion	22.75	31.89
PGSC0003DMT400005022	Potato	cytosol	32.87	31.88
KRG92161	Soybean	cytosol	33.99	31.84
KRH68025	Soybean	cytosol	23.31	31.44
KRH34627	Soybean	cytosol	32.58	31.44
KRH32876	Soybean	cytosol	24.16	31.16
EES19677	Sorghum	plastid	23.03	31.06
CDY55763	Canola	cytosol, mitochondrion	19.1	30.63
CDX81007	Canola	cytosol, mitochondrion	18.82	30.18
Bra028902.1-P	Field mustard	mitochondrion	30.06	29.89
CDY04838	Canola	mitochondrion	30.06	29.89
KXG33640	Sorghum	mitochondrion	21.91	29.43
AT3G11773.2	Thale cress	cytosol	15.17	27.0
KXG29248	Sorghum	cytosol	24.72	26.75
AT5G01420.1	Thale cress	cytosol	30.06	26.68
EER95421	Sorghum	mitochondrion, plastid	24.44	25.89
EES05526	Sorghum	mitochondrion	26.97	25.26
OQU81447	Sorghum	plastid	12.92	24.34
KXG31460	Sorghum	cytosol	26.4	23.5
EES10743	Sorghum	cytosol	29.21	23.06
EES14625	Sorghum	cytosol, plastid	26.12	22.96
EER88108	Sorghum	plastid	26.12	20.39
OQU82428	Sorghum	cytosol, plastid	28.09	20.12

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8062198	UniProt:C5WR48	ncoils:Coil	EnsemblPlants:EER91159
ProteinID:EER91159	ProteinID:EER91159.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF195	EnsemblPlantsGene:SORBI_3001G153500	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0001A8209E	RefSeq:XP_002464161.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:12339772..12341534

Molecular Weight (calculated)

37183.7 Da

IEP (calculated)

4.876

GRAVY (calculated)

-0.387

Length

356 amino acids

Sequence
(BLAST)

001: MGGLRSRILR TLQSFPNAAA QSSNLLLALP LGAGTSPQPP AAPCGGHLQE PAPQEPPLVD EAGAASEVPG GGGDDDDDKE NVSPGVTPRK AKKMKLSSDH
101: HGEEPADGAT RYRRPDLASA TLFDPDLLAA FRRAVDAYAQ ALEAAKRRDD DDIDDGEDGD GDGGGGGGEG GGPGVADPLE AFELRCPPGG ERAVVLYTTS
201: IRGVRKTFED CARVRRLLEG LRVAFLERDV SMHAPYREEL RALLMCCGQG QENDDGGGAR AFPLPPRLFV DGRYLGGAEE VVALHERSQL RPVLRRAARR
301: GAGEGPCAVC GGAWFVVCVG CSGSHWLHDA GGAAAASRVP CSACNENGLM PCPLCS

Best Arabidopsis Sequence Match ( AT5G01420.1 )
(BLAST)

001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.