CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024469_P001	Maize	cytosol, plastid	76.05	83.92
CDY00113	Canola	cytosol	15.56	47.37
Os08t0171333-00	Rice	plastid	36.79	47.15
EER94843	Sorghum	cytosol	21.98	43.84
TraesCS3D01G334100.1	Wheat	plastid	42.22	41.71
TraesCS3A01G340600.1	Wheat	plastid	41.98	41.46
TraesCS3B01G372200.1	Wheat	plastid	41.73	41.12
KXG36862	Sorghum	cytosol	21.23	40.38
EER95421	Sorghum	mitochondrion, plastid	29.63	35.71
EES18035	Sorghum	mitochondrion	20.99	35.42
EES05526	Sorghum	mitochondrion	33.09	35.26
EES19677	Sorghum	plastid	22.96	35.23
OQU82428	Sorghum	cytosol, plastid	42.47	34.61
KXG33640	Sorghum	mitochondrion	20.99	32.08
EER88108	Sorghum	plastid	35.31	31.36
PGSC0003DMT400017853	Potato	cytosol	23.46	29.41
Bra033062.1-P	Field mustard	cytosol	23.95	28.78
CDY70277	Canola	cytosol	23.7	28.49
CDY30281	Canola	cytosol	26.91	28.24
EER95886	Sorghum	mitochondrion	19.01	28.1
CDY67051	Canola	cytosol	26.17	27.97
CDY04039	Canola	cytosol	23.21	27.89
Solyc02g067400.1.1	Tomato	cytosol	19.51	27.82
OQU81447	Sorghum	plastid	12.84	27.51
Bra025638.1-P	Field mustard	cytosol	26.91	26.59
Bra025357.1-P	Field mustard	cytosol	26.91	26.52
CDX86410	Canola	cytosol	26.91	26.52
PGSC0003DMT400056766	Potato	cytosol	25.93	26.45
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	29.38	26.44
KRH40113	Soybean	cytosol, mitochondrion	29.88	26.42
CDY20015	Canola	cytosol	26.17	26.24
EER91159	Sorghum	mitochondrion	22.96	26.12
KRG93517	Soybean	cytosol	28.15	26.09
Bra039044.1-P	Field mustard	cytosol	27.16	26.07
KRH01158	Soybean	cytosol	29.63	25.86
CDX85224	Canola	cytosol	26.42	25.85
PGSC0003DMT400003335	Potato	cytosol	26.42	25.54
Solyc02g087850.1.1	Tomato	cytosol, plastid	26.42	25.54
KXG29248	Sorghum	cytosol	20.74	25.53
AT3G28850.1	Thale cress	cytosol	26.91	25.47
AT5G39865.1	Thale cress	cytosol, mitochondrion	24.44	25.38
EES10743	Sorghum	cytosol	23.21	20.84
KXG31460	Sorghum	cytosol	19.26	19.5

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:C5YHJ2	EnsemblPlants:EES14625	ProteinID:EES14625	ProteinID:EES14625.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF182	EnsemblPlantsGene:SORBI_3007G056800	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A87CCE
RefSeq:XP_002445130.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:5837978..5839195

Molecular Weight (calculated)

43252.9 Da

IEP (calculated)

4.757

GRAVY (calculated)

-0.336

Length

405 amino acids

Sequence
(BLAST)

001: MGCSSSREVG GGVVPPSAAP AERRQGPRSR SLGMCRGGHD SVHAYTALPL EEEPVKGARD PAAAEEEALP GEDAAVEEKR GHDAPSMAAK AAVMASLDDA
101: ASSWTARWSA EPAPSSSLPP EPLPALDLDP EVLPAFRQPV QVVPSPSHPT VLYPEQENPA PQEACDDDVD MRSPPARDIP EVTDFVRARV DVDELHEKLE
201: KKAAVVAVAA EEAPDVVVDD GDDVTAPPRR RLPRAGKPVV LYLTSLRSVR RTFEDCRAVR AILRCYRVRV DERDVSMHAA FRTELRDLLG DGGFENGPAL
301: PRVFVDGGGR LIDLGGAEEL RALHEAGELA RALAGCQQAA AAATTGHAGA CAACGEARFV PCETCHGSCK VFVDDERCRA RLAGFFRQCP DCNENGLIRC
401: PVCCY

Best Arabidopsis Sequence Match ( AT5G39865.1 )
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Arabidopsis Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.