Factsheet for AT5G39865.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30281	Canola	cytosol	67.44	68.13
CDY67051	Canola	cytosol	65.64	67.55
Bra025638.1-P	Field mustard	cytosol	67.18	63.9
AT3G28850.1	Thale cress	cytosol	62.82	57.24
PGSC0003DMT400017853	Potato	cytosol	44.87	54.18
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	54.36	47.11
Solyc02g067400.1.1	Tomato	cytosol	34.1	46.83
PGSC0003DMT400003335	Potato	cytosol	50.26	46.78
Zm00001d026424_P001	Maize	cytosol	14.87	46.4
Solyc02g087850.1.1	Tomato	cytosol, plastid	49.74	46.3
PGSC0003DMT400056766	Potato	cytosol	46.67	45.84
KRH40113	Soybean	cytosol, mitochondrion	52.56	44.76
KRG93517	Soybean	cytosol	49.74	44.39
KRH01158	Soybean	cytosol	51.54	43.32
Zm00001d027853_P001	Maize	plastid	33.59	40.18
EER95421	Sorghum	mitochondrion, plastid	33.59	38.99
TraesCS4A01G016500.1	Wheat	mitochondrion	32.82	38.79
HORVU4Hr1G075190.2	Barley	mitochondrion	32.31	38.53
TraesCS4D01G286300.1	Wheat	mitochondrion	32.05	38.34
GSMUA_Achr3P01620_001	Banana	mitochondrion	34.36	37.96
Os03t0170800-00	Rice	mitochondrion	31.28	37.89
GSMUA_Achr8P24180_001	Banana	cytosol	33.85	37.82
TraesCS4B01G287700.1	Wheat	mitochondrion	31.79	37.8
GSMUA_Achr4P00540_001	Banana	mitochondrion	37.69	37.4
EES05526	Sorghum	mitochondrion	33.85	34.74
Os02t0748800-00	Rice	cytosol, mitochondrion	32.82	34.69
TraesCS6D01G285000.1	Wheat	mitochondrion	33.08	34.13
Zm00001d052252_P001	Maize	mitochondrion	32.05	33.97
HORVU0Hr1G017160.1	Barley	mitochondrion	33.08	33.95
TraesCS6B01G334000.1	Wheat	mitochondrion	33.08	33.77
TraesCS6A01G305800.1	Wheat	mitochondrion	33.08	33.51
Zm00001d018058_P001	Maize	plastid	32.05	33.16
AT5G13810.1	Thale cress	plastid	22.31	31.75
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	32.56	31.44
AT1G32760.1	Thale cress	plastid	24.87	30.89
AT3G57070.1	Thale cress	plastid	32.31	30.22
Zm00001d002123_P001	Maize	plastid	32.31	29.72
Os06t0226100-00	Rice	plastid	28.97	29.5
AT5G58530.1	Thale cress	cytosol, plastid	20.51	29.3
Os04t0641300-01	Rice	cytosol, plastid	32.82	28.89
AT2G41330.1	Thale cress	plastid	29.74	28.86
Zm00001d044841_P001	Maize	plastid	31.54	28.15
AT4G10630.1	Thale cress	cytosol	23.85	27.84
Zm00001d037218_P001	Maize	plastid	30.51	27.8
TraesCS2D01G523500.1	Wheat	plastid	32.56	27.73
AT5G06470.1	Thale cress	cytosol, mitochondrion	16.92	27.62
HORVU7Hr1G038000.2	Barley	cytosol, plastid	29.74	27.42
TraesCS2B01G551200.1	Wheat	cytosol, plastid	32.05	27.29
TraesCS2A01G521700.1	Wheat	plastid	32.05	27.29
HORVU2Hr1G115200.2	Barley	cytosol	31.79	26.9
AT5G03870.1	Thale cress	cytosol	26.15	26.56
TraesCS3D01G334100.1	Wheat	plastid	27.69	26.34
TraesCS3A01G340600.1	Wheat	plastid	27.69	26.34
TraesCS3B01G372200.1	Wheat	plastid	27.69	26.28
Zm00001d024469_P001	Maize	cytosol, plastid	24.62	26.16
EER88108	Sorghum	plastid	30.51	26.1
OQU82428	Sorghum	cytosol, plastid	32.82	25.75
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	30.0	25.71
TraesCS7B01G090200.1	Wheat	cytosol, plastid	30.0	25.05
EES14625	Sorghum	cytosol, plastid	25.38	24.44
AT1G64500.1	Thale cress	cytosol	22.31	23.64
AT3G11773.2	Thale cress	cytosol	12.05	23.5
TraesCS7D01G186600.1	Wheat	plastid	29.74	23.06
Os08t0171333-00	Rice	plastid	17.18	21.2
AT5G01420.1	Thale cress	cytosol	21.03	20.45

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:833983	UniProt:A0A178UI93	ProteinID:AED94485.1	ArrayExpress:AT5G39865
EnsemblPlantsGene:AT5G39865	RefSeq:AT5G39865	TAIR:AT5G39865	RefSeq:AT5G39865-TAIR-G	EnsemblPlants:AT5G39865.1	TAIR:AT5G39865.1
EMBL:AY080615	EMBL:AY133745	Unigene:At.44006	ProteinID:BAB10211.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0016020	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	RefSeq:NP_680368.1	ProteinID:OAO93370.1
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	UniProt:Q9FLE8	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI00000A64AE	SEG:seg	:	:	:

Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]

Coordinates

chr5:-:15965301..15967186

Molecular Weight (calculated)

43946.2 Da

IEP (calculated)

6.360

GRAVY (calculated)

-0.521

Length

390 amino acids

Sequence
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.