Factsheet for Zm00001d002123_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026424_P001	Maize	cytosol	25.71	87.2
OQU82428	Sorghum	cytosol, plastid	87.03	74.25
Os04t0641300-01	Rice	cytosol, plastid	70.05	67.04
HORVU2Hr1G115200.2	Barley	cytosol	64.86	59.65
TraesCS2A01G521700.1	Wheat	plastid	64.39	59.61
TraesCS2D01G523500.1	Wheat	plastid	63.68	58.95
TraesCS2B01G551200.1	Wheat	cytosol, plastid	63.21	58.52
CDY00113	Canola	cytosol	16.27	51.88
Zm00001d029202_P001	Maize	cytosol	21.23	45.45
Zm00001d027853_P001	Maize	plastid	34.91	45.4
Zm00001d024469_P001	Maize	cytosol, plastid	39.15	45.23
Zm00001d012471_P001	Maize	cytosol, plastid	12.26	45.22
Zm00001d052252_P001	Maize	mitochondrion	38.68	44.57
Zm00001d018058_P001	Maize	plastid	38.68	43.5
Zm00001d022403_P001	Maize	cytosol, plastid	20.28	42.36
Zm00001d044841_P001	Maize	plastid	39.86	38.67
CDY04039	Canola	cytosol	29.72	37.39
PGSC0003DMT400017853	Potato	cytosol	28.3	37.15
Zm00001d037218_P001	Maize	plastid	37.5	37.15
CDY70277	Canola	cytosol	29.48	37.09
Bra033062.1-P	Field mustard	cytosol	29.25	36.8
Zm00001d010509_P001	Maize	mitochondrion	21.23	36.44
Zm00001d007885_P001	Maize	mitochondrion	19.1	36.16
Zm00001d038018_P001	Maize	mitochondrion	20.28	35.98
Zm00001d010594_P001	Maize	plastid	20.99	35.74
CDY67051	Canola	cytosol	31.84	35.62
PGSC0003DMT400056766	Potato	cytosol	32.78	35.01
CDY30281	Canola	cytosol	31.84	34.97
Solyc02g087850.1.1	Tomato	cytosol, plastid	33.49	33.89
PGSC0003DMT400003335	Potato	cytosol	33.49	33.89
Zm00001d012904_P001	Maize	cytosol	9.91	33.87
Bra025638.1-P	Field mustard	cytosol	32.55	33.66
Zm00001d054094_P001	Maize	cytosol	24.53	33.33
Bra025357.1-P	Field mustard	cytosol	32.31	33.33
CDX86410	Canola	cytosol	32.31	33.33
Solyc02g067400.1.1	Tomato	cytosol	22.17	33.1
CDX85224	Canola	cytosol	32.31	33.09
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	34.91	32.89
KRH40113	Soybean	cytosol, mitochondrion	35.14	32.53
Bra039044.1-P	Field mustard	cytosol	32.31	32.46
CDY20015	Canola	cytosol	30.9	32.43
AT5G39865.1	Thale cress	cytosol, mitochondrion	29.72	32.31
KRH01158	Soybean	cytosol	34.91	31.9
AT3G28850.1	Thale cress	cytosol	32.08	31.78
KRG93517	Soybean	cytosol	32.31	31.35
Zm00001d038445_P001	Maize	cytosol	20.05	30.69
Zm00001d018827_P001	Maize	mitochondrion	18.87	29.74
Zm00001d043006_P001	Maize	plastid	20.05	29.41
Zm00001d033205_P001	Maize	mitochondrion	23.58	28.9
Zm00001d013668_P001	Maize	mitochondrion	23.58	28.57
Zm00001d003779_P001	Maize	cytosol	25.94	24.61
Zm00001d039270_P001	Maize	cytosol	20.05	21.41

Protein Annotations

EntrezGene:100274193	Gene3D:3.40.30.10	MapMan:35.1	UniProt:B4FZH4	EMBL:BT042512	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	ProteinID:ONM13137.1	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF80	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00017B7E1A	EnsemblPlantsGene:Zm00001d002123
EnsemblPlants:Zm00001d002123_P001	EnsemblPlants:Zm00001d002123_T001	SEG:seg	:	:	:

Description

Glutaredoxin family protein

Coordinates

chr2:-:6155499..6156773

Molecular Weight (calculated)

46192.7 Da

IEP (calculated)

4.926

GRAVY (calculated)

-0.362

Length

424 amino acids

Sequence
(BLAST)

001: MGCATSTEAR RDMVRTGAGA PPRRSFSLPS VDRQRLRLKT VSMLGNLGLA GSSARHSSSC RHATLSVEDL MKSDNDHAAD AVLLGDDAAK RSLKPRTPTL
101: TPPNEPEVIN AWELMAGLED DAPTPRATYR CSLLNELPQE LGLEAPPLPE WMQADMDMPV ALDFDPEVLS GFRDALEATA PSPEHVVSSA EADTETPREQ
201: ERKGADACDM PTSPATGNMP ELSGLVRARI IAFQEKIERR GSKGRDAKVS SRWPPGGERK AVVYYTSLRG VRKTFVDCCA VRSILRSYGV RLDERDVSMH
301: AVFKAELAEL LGPGFAAAAL PRVFVDGRYL GGAEDVHFLH EAGELGRVLE GCEAAPSRKL GYMEACAACG DVRFVPCETC YGSCKVFVED DDADDMYQYH
401: DVGEFRRCPD CNENGLVRCP VCCC

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.