CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01158	Soybean	cytosol	94.32	93.1
CDY00113	Canola	cytosol	18.56	63.91
PGSC0003DMT400017853	Potato	cytosol	41.27	58.51
PGSC0003DMT400003335	Potato	cytosol	52.62	57.52
Solyc02g087850.1.1	Tomato	cytosol, plastid	52.4	57.28
KRG93517	Soybean	cytosol	54.59	57.21
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	55.9	56.89
CDY04039	Canola	cytosol	41.05	55.79
PGSC0003DMT400056766	Potato	cytosol	48.25	55.67
CDY70277	Canola	cytosol	40.83	55.49
Bra033062.1-P	Field mustard	cytosol	40.83	55.49
CDY30281	Canola	cytosol	46.51	55.18
CDY67051	Canola	cytosol	45.63	55.15
Zm00001d026424_P001	Maize	cytosol	14.41	52.8
Bra025638.1-P	Field mustard	cytosol	47.16	52.68
AT5G39865.1	Thale cress	cytosol, mitochondrion	44.76	52.56
CDX86410	Canola	cytosol	47.16	52.55
Bra025357.1-P	Field mustard	cytosol	47.16	52.55
AT3G28850.1	Thale cress	cytosol	48.69	52.1
CDY20015	Canola	cytosol	45.85	51.98
Bra039044.1-P	Field mustard	cytosol	47.82	51.9
CDX85224	Canola	cytosol	46.51	51.45
Solyc02g067400.1.1	Tomato	cytosol	31.88	51.41
GSMUA_Achr3P01620_001	Banana	mitochondrion	34.93	45.33
Zm00001d027853_P001	Maize	plastid	30.79	43.25
EER95421	Sorghum	mitochondrion, plastid	31.22	42.56
GSMUA_Achr4P00540_001	Banana	mitochondrion	36.24	42.24
Os03t0170800-00	Rice	mitochondrion	29.69	42.24
HORVU4Hr1G075190.2	Barley	mitochondrion	30.13	42.2
TraesCS4A01G016500.1	Wheat	mitochondrion	30.13	41.82
TraesCS4B01G287700.1	Wheat	mitochondrion	29.91	41.77
TraesCS4D01G286300.1	Wheat	mitochondrion	29.69	41.72
GSMUA_Achr8P24180_001	Banana	cytosol	30.79	40.4
KRH41800	Soybean	cytosol	23.8	40.37
Os02t0748800-00	Rice	cytosol, mitochondrion	30.35	37.67
HORVU0Hr1G017160.1	Barley	mitochondrion	31.0	37.37
EES05526	Sorghum	mitochondrion	31.0	37.37
KRH30192	Soybean	plastid	18.78	37.23
Zm00001d052252_P001	Maize	mitochondrion	29.69	36.96
TraesCS6B01G334000.1	Wheat	mitochondrion	30.79	36.91
Zm00001d018058_P001	Maize	plastid	30.35	36.87
TraesCS6D01G285000.1	Wheat	mitochondrion	30.35	36.77
KRG97693	Soybean	plastid	18.34	36.68
TraesCS6A01G305800.1	Wheat	mitochondrion	30.79	36.62
KRG98239	Soybean	plastid	18.78	36.44
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	31.22	35.4
Zm00001d002123_P001	Maize	plastid	32.53	35.14
KRH14919	Soybean	plastid	18.34	34.71
KRH31178	Soybean	plastid	17.25	34.5
KRH62918	Soybean	cytosol, plastid	19.0	33.85
KRH13399	Soybean	plastid	19.21	32.96
Os04t0641300-01	Rice	cytosol, plastid	31.88	32.96
Os06t0226100-00	Rice	plastid	27.29	32.64
KRH20755	Soybean	plastid	19.0	32.1
KRH72143	Soybean	mitochondrion	18.34	31.82
HORVU7Hr1G038000.2	Barley	cytosol, plastid	29.26	31.68
HORVU2Hr1G115200.2	Barley	cytosol	31.88	31.67
KRH72724	Soybean	plastid	19.21	31.32
Zm00001d037218_P001	Maize	plastid	29.26	31.31
TraesCS2B01G551200.1	Wheat	cytosol, plastid	31.22	31.22
TraesCS2D01G523500.1	Wheat	plastid	31.22	31.22
TraesCS2A01G521700.1	Wheat	plastid	31.0	31.0
KRG95123	Soybean	plastid	28.6	30.9
KRH32876	Soybean	cytosol	18.56	30.8
Zm00001d044841_P001	Maize	plastid	29.04	30.43
KRG96283	Soybean	mitochondrion	16.81	30.32
Zm00001d024469_P001	Maize	cytosol, plastid	24.24	30.25
OQU82428	Sorghum	cytosol, plastid	32.75	30.18
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	29.91	30.11
EES14625	Sorghum	cytosol, plastid	26.42	29.88
TraesCS7B01G090200.1	Wheat	cytosol, plastid	30.13	29.55
KRH68025	Soybean	cytosol	17.03	29.55
TraesCS3B01G372200.1	Wheat	plastid	26.2	29.2
KRH17081	Soybean	plastid	19.21	29.14
TraesCS3D01G334100.1	Wheat	plastid	25.98	29.02
TraesCS3A01G340600.1	Wheat	plastid	25.98	29.02
EER88108	Sorghum	plastid	28.82	28.95
KRH73271	Soybean	plastid	18.56	28.24
KRH60067	Soybean	cytosol	20.74	28.19
TraesCS7D01G186600.1	Wheat	plastid	30.13	27.44
KRH66801	Soybean	plastid	21.4	26.13
KRH67928	Soybean	cytosol	25.33	25.33
KRG92161	Soybean	cytosol	20.96	25.26
KRH34627	Soybean	cytosol	20.09	24.93
Os08t0171333-00	Rice	plastid	16.81	24.37

Protein Annotations

EntrezGene:100791030	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02006021	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G239300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	UniProt:I1L5Y8	InterPro:IPR002109	EnsemblPlants:KRH40113
ProteinID:KRH40113	ProteinID:KRH40113.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00023385E1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:46182249..46184658

Molecular Weight (calculated)

50913.9 Da

IEP (calculated)

4.546

GRAVY (calculated)

-0.605

Length

458 amino acids

Sequence
(BLAST)

001: MGCASSKQKK CRRCNAPYSP APRSYSMHVH HPPLAEGDSY HVVALTSTTL GTLKLNSPAP TQNFSGNCNH DFKLSNGKLG NAESFRFDSE SFVQRLEEEK
101: EKKSEVLEKD KKEEFSMGLI EAKTWSNMIE QKLPKVFPKT PIRTPPGEPE TINTWELMEG LEDTTPFRSP IHFRSFSFDF NGGDDVGDGD LDVDVDPPKM
201: SVVASPKPMW LLMTEEESRL NPAISDFDPE VISAFRKSLQ QLSPDSPFHL RPEPGDQDKQ GTKKGSSFEE NDFVVDDVKV DDPCGKDKLL LYFTSLRGVR
301: KTYEDCCQVR MILKGLGIRV DERDVSMHSG FKEELKELLG DGHGGLGLPR VFLGGNYIGG AEEIQRLHED GKLEKLLGCC EKIEDSVGGD GVGGVCEACG
401: DIRFVPCETC CGSCKIYYEG DEDENEEEYV DGEVGECGFQ RCPDCNENGL IRCPMCCC

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.