Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 6
- extracellular 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13399 | Soybean | plastid | 90.41 | 91.76 |
| VIT_13s0019g00340.t01 | Wine grape | plastid | 58.3 | 58.96 |
| KRH62918 | Soybean | cytosol, plastid | 53.87 | 56.81 |
| Solyc11g005270.1.1 | Tomato | cytosol | 38.75 | 55.26 |
| CDY67732 | Canola | plastid | 51.66 | 54.05 |
| CDY70634 | Canola | plastid | 52.4 | 53.18 |
| CDX78539 | Canola | cytosol, plastid | 51.29 | 53.05 |
| Bra006216.1-P | Field mustard | plastid | 51.66 | 53.03 |
| Bra008801.1-P | Field mustard | plastid | 51.66 | 52.43 |
| CDX70521 | Canola | plastid | 51.66 | 52.24 |
| AT5G13810.1 | Thale cress | plastid | 52.77 | 52.19 |
| Solyc03g078380.1.1 | Tomato | cytosol | 50.18 | 52.11 |
| PGSC0003DMT400047487 | Potato | cytosol | 50.55 | 51.89 |
| PGSC0003DMT400015465 | Potato | cytosol | 45.02 | 44.53 |
| KRH30192 | Soybean | plastid | 33.95 | 39.83 |
| KRG98239 | Soybean | plastid | 34.32 | 39.41 |
| KRH31178 | Soybean | plastid | 29.15 | 34.5 |
| KRH14919 | Soybean | plastid | 30.63 | 34.3 |
| KRG97693 | Soybean | plastid | 28.78 | 34.06 |
| KRH72724 | Soybean | plastid | 32.1 | 30.96 |
| KRH17081 | Soybean | plastid | 32.84 | 29.47 |
| KRG95123 | Soybean | plastid | 45.76 | 29.25 |
| KRG96283 | Soybean | mitochondrion | 26.57 | 28.35 |
| KRH41800 | Soybean | cytosol | 27.68 | 27.78 |
| KRH68025 | Soybean | cytosol | 26.57 | 27.27 |
| KRH72143 | Soybean | mitochondrion | 26.57 | 27.27 |
| KRH73271 | Soybean | plastid | 30.26 | 27.24 |
| KRH32876 | Soybean | cytosol | 26.94 | 26.45 |
| KRH66801 | Soybean | plastid | 30.26 | 21.87 |
| KRH60067 | Soybean | cytosol | 25.09 | 20.18 |
| KRG93517 | Soybean | cytosol | 32.47 | 20.14 |
| KRH40113 | Soybean | cytosol, mitochondrion | 32.1 | 19.0 |
| KRH01158 | Soybean | cytosol | 32.1 | 18.75 |
| KRH34627 | Soybean | cytosol | 25.46 | 18.7 |
| KRG92161 | Soybean | cytosol | 26.2 | 18.68 |
| KRH67928 | Soybean | cytosol | 29.52 | 17.47 |
Protein Annotations
| EntrezGene:100779952 | Gene3D:3.40.30.10 | MapMan:35.1 | EMBL:ACUP02008302 | EnsemblPlantsGene:GLYMA_13G198500 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 |
| GO:GO:0055114 | InterPro:Glutaredoxin | UniProt:I1M0T7 | InterPro:IPR002109 | EnsemblPlants:KRH20755 | ProteinID:KRH20755 |
| ProteinID:KRH20755.1 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF84 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI000233BC29 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:31225402..31227494
Molecular Weight (calculated)
30108.7 Da
IEP (calculated)
8.759
GRAVY (calculated)
-0.552
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEFGNNNNN GANTTSSRFS FFNRSLTTLR NEKPPQLDRS VTKLVESSRG GGGGGSVVKR LCSFFESAKS SSSEHQKLKP SKSIENSDPS VKSLDSPAKS
101: IDSSPAIRLP GTEDRIVLYF TSLRGIRRTY EDCYAVRMIF RGFRVWVDER DISMDANYRK ELMSVLFGEN NNNNNKKKGH VALPQVFIRG RHVGGADVIK
201: HMWEVGELEK VLEGLPRTKG GFVCESCGDV RFVPCGNCSG SRKVFDEDEG VLKRCLECNE NGLIRCPNCC S
101: IDSSPAIRLP GTEDRIVLYF TSLRGIRRTY EDCYAVRMIF RGFRVWVDER DISMDANYRK ELMSVLFGEN NNNNNKKKGH VALPQVFIRG RHVGGADVIK
201: HMWEVGELEK VLEGLPRTKG GFVCESCGDV RFVPCGNCSG SRKVFDEDEG VLKRCLECNE NGLIRCPNCC S
001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
Arabidopsis Description
AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.