CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH12155
KRH37161

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	KRH12155	AT1G30860.1	21798944
AT5G58530.1	KRH37161	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17081	Soybean	plastid	93.24	86.75
KRH30192	Soybean	plastid	53.38	64.94
KRG98239	Soybean	plastid	52.67	62.71
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	49.82	56.91
Bra002640.1-P	Field mustard	cytosol	23.49	55.93
Solyc06g082180.1.1	Tomato	cytosol, plastid	49.11	54.33
PGSC0003DMT400078242	Potato	cytosol, plastid	48.4	53.54
CDY32794	Canola	peroxisome	48.75	52.9
CDY59509	Canola	cytosol, plastid	46.98	52.38
Bra020363.1-P	Field mustard	cytosol, plastid	46.62	51.98
CDY32696	Canola	cytosol, plastid	46.26	51.79
PGSC0003DMT400078241	Potato	cytosol, plastid	44.13	51.67
AT5G58530.1	Thale cress	cytosol, plastid	49.47	50.92
KRH31178	Soybean	plastid	40.21	49.34
KRH14919	Soybean	plastid	40.93	47.52
GSMUA_Achr6P32840_001	Banana	cytosol	38.79	46.78
KRG97693	Soybean	plastid	38.08	46.72
GSMUA_Achr4P18760_001	Banana	plastid	37.37	44.49
GSMUA_Achr6P23380_001	Banana	mitochondrion	37.01	44.26
GSMUA_Achr5P29410_001	Banana	mitochondrion	35.59	43.29
GSMUA_Achr5P14280_001	Banana	plastid	34.88	42.79
TraesCS1A01G222600.1	Wheat	mitochondrion	34.88	42.42
EES18035	Sorghum	mitochondrion	35.94	42.08
Zm00001d012471_P001	Maize	cytosol, plastid	17.08	41.74
TraesCS3A01G349200.1	Wheat	plastid	36.3	41.13
TraesCS1B01G235900.1	Wheat	mitochondrion	33.81	41.13
TraesCS1D01G224200.1	Wheat	mitochondrion	33.81	41.13
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	35.23	41.08
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	36.3	40.96
Os01t0829400-01	Rice	mitochondrion	37.01	40.78
HORVU3Hr1G087930.1	Barley	plastid	35.94	40.73
TraesCS3D01G343100.1	Wheat	plastid	36.3	40.64
GSMUA_Achr7P18270_001	Banana	mitochondrion	37.37	40.38
Os05t0471350-00	Rice	mitochondrion, plastid	36.3	39.69
Zm00001d010509_P001	Maize	mitochondrion	34.52	39.27
KRH73271	Soybean	plastid	41.99	39.2
KXG33640	Sorghum	mitochondrion	36.65	38.87
Zm00001d038018_P001	Maize	mitochondrion	32.74	38.49
EES19677	Sorghum	plastid	35.23	37.5
Zm00001d010594_P001	Maize	plastid	32.74	36.95
HORVU1Hr1G070570.1	Barley	plastid	33.1	35.63
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	31.32	35.06
Zm00001d043006_P001	Maize	plastid	35.94	34.95
TraesCS1D01G294800.1	Wheat	plastid	30.96	34.66
TraesCS1A01G296500.1	Wheat	mitochondrion	30.61	33.99
Zm00001d038445_P001	Maize	cytosol	33.45	33.94
KRH62918	Soybean	cytosol, plastid	30.96	33.85
Os10t0343900-01	Rice	cytosol	15.66	33.33
OQU81447	Sorghum	plastid	21.71	32.28
KRH20755	Soybean	plastid	30.96	32.1
KRH13399	Soybean	plastid	29.54	31.09
KRH41800	Soybean	cytosol	28.11	29.26
Solyc06g082170.2.1	Tomato	cytosol, plastid	43.06	29.16
Os05t0353600-00	Rice	plastid	34.16	28.66
KRH72143	Soybean	mitochondrion	26.69	28.41
HORVU7Hr1G076170.1	Barley	plastid	22.06	27.93
KRH32876	Soybean	cytosol	25.98	26.45
KRG96283	Soybean	mitochondrion	23.84	26.38
KRH68025	Soybean	cytosol	24.2	25.76
KRG95123	Soybean	plastid	34.88	23.11
KRH60067	Soybean	cytosol	27.05	22.55
KRG92161	Soybean	cytosol	27.4	20.26
KRH34627	Soybean	cytosol	26.33	20.05
KRH01158	Soybean	cytosol	32.03	19.4
KRG93517	Soybean	cytosol	29.89	19.22
KRH40113	Soybean	cytosol, mitochondrion	31.32	19.21
KRH67928	Soybean	cytosol	29.18	17.9
KRH66801	Soybean	plastid	23.84	17.87

Protein Annotations

EntrezGene:100810320	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02001237	EnsemblPlantsGene:GLYMA_02G229600	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	UniProt:I1JHG0	InterPro:IPR002109	EnsemblPlants:KRH72724	ProteinID:KRH72724
ProteinID:KRH72724.1	PFAM:PF00462	PFscan:PS51257	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF201
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002337637	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:41712652..41714381

Molecular Weight (calculated)

31313.4 Da

IEP (calculated)

8.214

GRAVY (calculated)

-0.449

Length

281 amino acids

Sequence
(BLAST)

001: MWRPWGKSTV RIHSASSSPS STFSCSSFKD IQTLCLDEPP QQNQHHQQLP SPSPTRKPSV FHRVRLANSL LRTWSTHLHP QPQPPKLPEP PESEPDVVVS
101: KPEPQQPAIY YFPGAEQRVV VYYTSLRVVR PTFEACKSVL SILRGFLVQI DERDVSMDSG FTAELNRIMG RPVPGPGPSL PRVFIAGRYV GGAEEVRQLN
201: EVGELKKILM DLPAVDPTTE CHVCAGHRFV LCDECNGSRK VYAEKTGFKT CNACNENGLV KCPSCFPSST SLPKFNNEIQ N

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.