Factsheet for Bra002640.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023148.1-P
Bra039871.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	Bra023148.1-P	AT1G30860.1	21798944
AT5G58530.1	Bra039871.1-P	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32794	Canola	peroxisome	95.76	43.63
Zm00001d012471_P001	Maize	cytosol, plastid	41.53	42.61
Bra005786.1-P	Field mustard	cytosol	38.98	42.2
Bra020363.1-P	Field mustard	cytosol, plastid	78.81	36.9
AT5G58530.1	Thale cress	cytosol, plastid	79.66	34.43
Os10t0343900-01	Rice	cytosol	31.36	28.03
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	55.93	26.83
PGSC0003DMT400078241	Potato	cytosol, plastid	54.24	26.67
KRH30192	Soybean	plastid	50.85	25.97
GSMUA_Achr5P14280_001	Banana	plastid	50.0	25.76
OQU81447	Sorghum	plastid	40.68	25.4
GSMUA_Achr6P32840_001	Banana	cytosol	49.15	24.89
Solyc06g082180.1.1	Tomato	cytosol, plastid	53.39	24.8
PGSC0003DMT400078242	Potato	cytosol, plastid	53.39	24.8
Bra004972.1-P	Field mustard	mitochondrion	50.85	24.29
GSMUA_Achr6P23380_001	Banana	mitochondrion	48.31	24.26
KRG98239	Soybean	plastid	48.31	24.15
KRH72724	Soybean	plastid	55.93	23.49
GSMUA_Achr5P29410_001	Banana	mitochondrion	45.76	23.38
Bra004971.1-P	Field mustard	plastid	50.0	23.32
KRH17081	Soybean	plastid	57.63	22.52
EES18035	Sorghum	mitochondrion	45.76	22.5
GSMUA_Achr4P18760_001	Banana	plastid	44.92	22.46
Zm00001d038018_P001	Maize	mitochondrion	44.07	21.76
Zm00001d010594_P001	Maize	plastid	45.76	21.69
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	44.07	21.58
TraesCS1A01G222600.1	Wheat	mitochondrion	41.53	21.21
TraesCS1B01G235900.1	Wheat	mitochondrion	41.53	21.21
TraesCS1D01G224200.1	Wheat	mitochondrion	41.53	21.21
HORVU1Hr1G070570.1	Barley	plastid	46.61	21.07
TraesCS3A01G349200.1	Wheat	plastid	44.07	20.97
HORVU3Hr1G087930.1	Barley	plastid	44.07	20.97
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	44.07	20.88
TraesCS3D01G343100.1	Wheat	plastid	44.07	20.72
TraesCS1D01G294800.1	Wheat	plastid	44.07	20.72
Os01t0829400-01	Rice	mitochondrion	44.07	20.39
Zm00001d010509_P001	Maize	mitochondrion	42.37	20.24
Os05t0471350-00	Rice	mitochondrion, plastid	44.07	20.23
Bra006216.1-P	Field mustard	plastid	44.92	20.08
EES19677	Sorghum	plastid	44.92	20.08
GSMUA_Achr7P18270_001	Banana	mitochondrion	44.07	20.0
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	42.37	19.92
TraesCS1A01G296500.1	Wheat	mitochondrion	42.37	19.76
KXG33640	Sorghum	mitochondrion	44.07	19.62
Bra008801.1-P	Field mustard	plastid	43.22	19.1
HORVU7Hr1G076170.1	Barley	plastid	34.75	18.47
Zm00001d038445_P001	Maize	cytosol	42.37	18.05
Bra009197.1-P	Field mustard	cytosol	35.59	17.36
Zm00001d043006_P001	Maize	plastid	42.37	17.3
Bra005898.1-P	Field mustard	cytosol, mitochondrion	34.75	16.6
Bra023284.1-P	Field mustard	cytosol	40.68	16.0
Os05t0353600-00	Rice	plastid	44.92	15.82
Bra000716.1-P	Field mustard	cytosol	39.83	15.16
Solyc06g082170.2.1	Tomato	cytosol, plastid	52.54	14.94
Bra033062.1-P	Field mustard	cytosol	40.68	14.24
Bra028812.1-P	Field mustard	nucleus	38.98	13.18
Bra016941.1-P	Field mustard	plastid	40.68	13.04
Bra014646.1-P	Field mustard	plastid	39.83	11.96
Bra025357.1-P	Field mustard	cytosol	41.53	11.92
Bra000225.1-P	Field mustard	plastid	39.83	11.72
Bra040917.1-P	Field mustard	cytosol	35.59	11.67
Bra007299.1-P	Field mustard	plastid	38.98	11.65
Bra039044.1-P	Field mustard	cytosol	41.53	11.61
Bra025638.1-P	Field mustard	cytosol	39.83	11.46
Bra028902.1-P	Field mustard	mitochondrion	31.36	10.34

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra002640	EnsemblPlants:Bra002640.1	EnsemblPlants:Bra002640.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4CEK9	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF201	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002543747	:	:

Description

AT5G58530 (E=4e-051) | glutaredoxin family protein

Coordinates

chrA10:+:8431128..8431484

Molecular Weight (calculated)

13076.7 Da

IEP (calculated)

7.744

GRAVY (calculated)

-0.299

Length

118 amino acids

Sequence
(BLAST)

001: MDASFAAELE RIFDGDNKDL QSKTKLPRVF IGGRYVGGAE EVKQLHEIGE LKKLVQELPR IEPRVCDMCG GHRFVPCNVC HGSHKVHTEK LGFRTCSTCN
101: ENGLVRCSSC LFVSASHA

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.