Factsheet for Bra004972.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74802	Canola	cytosol, mitochondrion	99.19	99.19
Bra004971.1-P	Field mustard	plastid	85.83	83.79
Bra002640.1-P	Field mustard	cytosol	24.29	50.85
KRG97693	Soybean	plastid	42.91	46.29
KRH14919	Soybean	plastid	42.51	43.39
KRH31178	Soybean	plastid	40.08	43.23
GSMUA_Achr5P29410_001	Banana	mitochondrion	36.84	39.39
Bra005786.1-P	Field mustard	cytosol	17.0	38.53
Zm00001d012471_P001	Maize	cytosol, plastid	17.81	38.26
GSMUA_Achr5P14280_001	Banana	plastid	35.22	37.99
GSMUA_Achr4P18760_001	Banana	plastid	35.63	37.29
GSMUA_Achr6P23380_001	Banana	mitochondrion	34.82	36.6
Bra020363.1-P	Field mustard	cytosol, plastid	36.84	36.11
Os01t0829400-01	Rice	mitochondrion	36.84	35.69
GSMUA_Achr6P32840_001	Banana	cytosol	33.6	35.62
KRH73271	Soybean	plastid	42.51	34.88
TraesCS3A01G349200.1	Wheat	plastid	34.82	34.68
EES18035	Sorghum	mitochondrion	33.6	34.58
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	34.82	34.54
EES19677	Sorghum	plastid	36.84	34.47
HORVU3Hr1G087930.1	Barley	plastid	34.41	34.27
TraesCS3D01G343100.1	Wheat	plastid	34.82	34.26
Os05t0471350-00	Rice	mitochondrion, plastid	35.63	34.24
TraesCS1A01G222600.1	Wheat	mitochondrion	31.98	34.2
TraesCS1B01G235900.1	Wheat	mitochondrion	31.17	33.33
TraesCS1D01G224200.1	Wheat	mitochondrion	31.17	33.33
KXG33640	Sorghum	mitochondrion	35.63	33.21
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	32.39	33.2
Zm00001d038018_P001	Maize	mitochondrion	31.98	33.05
Zm00001d010594_P001	Maize	plastid	33.2	32.93
Zm00001d010509_P001	Maize	mitochondrion	32.79	32.79
Os10t0343900-01	Rice	cytosol	17.41	32.58
GSMUA_Achr7P18270_001	Banana	mitochondrion	33.2	31.54
Zm00001d043006_P001	Maize	plastid	35.63	30.45
Zm00001d038445_P001	Maize	cytosol	34.01	30.32
HORVU1Hr1G070570.1	Barley	plastid	30.36	28.74
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	29.15	28.69
TraesCS1D01G294800.1	Wheat	plastid	28.74	28.29
TraesCS1A01G296500.1	Wheat	mitochondrion	28.74	28.06
OQU81447	Sorghum	plastid	21.46	28.04
HORVU7Hr1G076170.1	Barley	plastid	24.7	27.48
Bra008801.1-P	Field mustard	plastid	29.55	27.34
Bra006216.1-P	Field mustard	plastid	29.15	27.27
Bra009197.1-P	Field mustard	cytosol	25.91	26.45
Bra005898.1-P	Field mustard	cytosol, mitochondrion	25.91	25.91
Os05t0353600-00	Rice	plastid	31.98	23.58
Bra023284.1-P	Field mustard	cytosol	26.72	22.0
Bra000716.1-P	Field mustard	cytosol	27.53	21.94
Bra033062.1-P	Field mustard	cytosol	29.15	21.36
Bra028812.1-P	Field mustard	nucleus	29.15	20.63
Bra016941.1-P	Field mustard	plastid	29.96	20.11
Bra025638.1-P	Field mustard	cytosol	32.79	19.76
Bra039044.1-P	Field mustard	cytosol	33.6	19.67
Bra007299.1-P	Field mustard	plastid	31.17	19.49
Bra000225.1-P	Field mustard	plastid	31.17	19.2
Bra014646.1-P	Field mustard	plastid	30.36	19.08
Bra025357.1-P	Field mustard	cytosol	30.77	18.49
Bra040917.1-P	Field mustard	cytosol	25.51	17.5
Bra028902.1-P	Field mustard	mitochondrion	24.29	16.76

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra004972	EnsemblPlants:Bra004972.1	EnsemblPlants:Bra004972.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4CL86	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF197	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00025472DB	:

Description

AT5G58530 (E=4e-043) | glutaredoxin family protein

Coordinates

chrA05:+:2725276..2726019

Molecular Weight (calculated)

28381.1 Da

IEP (calculated)

8.362

GRAVY (calculated)

-0.400

Length

247 amino acids

Sequence
(BLAST)

001: MFWNWFQLRK RPHEVAPDTP KWSSRRFSCS SFKDVHNLFL YDNDVPSPEL QVLHQPRNPK IDRCTSRTPR LTTKTLFSTD HGGVVLYYTS LRIVRKTFEE
101: CRAVRAILHR LRIPIDERDL TMDSRFHDEL HAIFGTKNVE LPKVFIGGRY IGGAEEIKKL NESGELRKMI GELPPSDGRF SENCELCGGW RFVVCERCNG
201: SHKIFLEETG FVNCTVCSVE GLVRCSSCFP IHRTIGDGAM TSPVDLK

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.