Factsheet for Bra000716.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90765	Canola	cytosol	85.81	99.63
AT4G10630.1	Thale cress	cytosol	81.29	75.45
KRH41800	Soybean	cytosol	57.1	65.56
Bra023284.1-P	Field mustard	cytosol	63.23	65.33
VIT_02s0025g02700.t01	Wine grape	cytosol	57.42	57.61
Solyc08g083270.1.1	Tomato	cytosol	53.87	51.07
PGSC0003DMT400031889	Potato	plastid	50.32	49.84
Bra005786.1-P	Field mustard	cytosol	16.77	47.71
Zm00001d054094_P001	Maize	cytosol	43.23	42.95
TraesCS1A01G103100.1	Wheat	cytosol	41.94	42.76
TraesCS1D01G095500.1	Wheat	cytosol	42.26	42.67
HORVU1Hr1G021100.2	Barley	cytosol	42.58	42.44
TraesCS1B01G114500.1	Wheat	cytosol	42.26	42.39
KXG29248	Sorghum	cytosol	42.58	40.12
Bra002640.1-P	Field mustard	cytosol	15.16	39.83
Bra005898.1-P	Field mustard	cytosol, mitochondrion	27.42	34.41
Bra009197.1-P	Field mustard	cytosol	26.45	33.88
Bra028812.1-P	Field mustard	nucleus	38.06	33.81
Os02t0102000-00	Rice	cytosol	31.29	30.12
Bra020363.1-P	Field mustard	cytosol, plastid	23.87	29.37
Bra040917.1-P	Field mustard	cytosol	32.58	28.06
Bra004972.1-P	Field mustard	mitochondrion	21.94	27.53
Bra008801.1-P	Field mustard	plastid	23.55	27.34
Bra006216.1-P	Field mustard	plastid	23.23	27.27
Bra033062.1-P	Field mustard	cytosol	29.03	26.71
Bra028902.1-P	Field mustard	mitochondrion	30.65	26.54
Bra004971.1-P	Field mustard	plastid	21.61	26.48
Bra016941.1-P	Field mustard	plastid	30.97	26.09
Bra000225.1-P	Field mustard	plastid	30.97	23.94
Bra007299.1-P	Field mustard	plastid	30.32	23.8
Bra025638.1-P	Field mustard	cytosol	30.65	23.17
Bra014646.1-P	Field mustard	plastid	28.71	22.65
Bra025357.1-P	Field mustard	cytosol	30.0	22.63
Bra039044.1-P	Field mustard	cytosol	30.0	22.04

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra000716	EnsemblPlants:Bra000716.1	EnsemblPlants:Bra000716.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4C938	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF79	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000254035E	SEG:seg

Description

AT1G32760 (E=8e-084) | glutaredoxin family protein

Coordinates

chrA03:-:12639864..12640796

Molecular Weight (calculated)

33300.9 Da

IEP (calculated)

7.476

GRAVY (calculated)

-0.308

Length

310 amino acids

Sequence
(BLAST)

001: MGCVSSNLLN HDEDFPQIGG SSAFGHHIVK LTSTTYGLLT LDPPSPPTTP PQKFTTGTDT KSLLSEPEVI NSWELMSGLD GESFRFTPLP KTPPVKYKVF
101: GGDNKENSDP NRKIPTKSLS KEVLKPLDPK PSERFERICP PGGENRVVIY TTSLRGVRRT FEECNTVRAA VEGSGVVICE RDVSMDRGFR EELASLMAKR
201: ISNGNDKASA LPPRVFVKGM YIGGAEEVLR LVEEGVFGEM VRGLPSKKAG GCRGGGDGDG ACDGCGGLFF LPCFRCNGSC KVVKGWGSSA VVVRCTECNE
301: NGLVPCPICS

Best Arabidopsis Sequence Match ( AT4G10630.1 )
(BLAST)

001: MGCVSSNLLN HDEDFSQIGG GSSAFGHHIV KLTSTTYGLL TLDPPPPPSP PMTPPEKFTV DTKSKSIWSE PRVIKSEPEI INSWELMSGL DGESFRFTPL
101: PKTPVKYKVF GGENKENSDP SRRNPRKNLN DEVLKPLDLN REDSDSNSRS PRKSFKPLDL KLDEKFERIC PPGGENRVVM YTTSLRGVRQ TFEACNAVRA
201: AVESFGVVVC ERDVSMDRRF REELVSLMAK RVGDEGVAAL PPRVFVKGRY IGGGEEVLRL VEEGSFGELI SGIPRKKAGG CESGACDGCG GLFFLPCFRC
301: NGSCKMVKGW GSASVVVRCN ECNENGLVPC PICS

Arabidopsis Description

F3H7.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.