Factsheet for Bra040917.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47842	Canola	cytosol	98.33	98.33
CDY62024	Canola	cytosol	95.56	95.56
AT1G64500.1	Thale cress	cytosol	85.83	83.97
VIT_02s0025g01710.t01	Wine grape	cytosol	48.06	45.77
KRH60067	Soybean	cytosol	42.22	45.1
Solyc08g082590.2.1	Tomato	cytosol	48.89	44.78
PGSC0003DMT400031969	Potato	cytosol	47.78	43.99
Bra005786.1-P	Field mustard	cytosol	11.94	39.45
GSMUA_Achr10P...	Banana	cytosol	39.17	37.9
Bra002640.1-P	Field mustard	cytosol	11.67	35.59
Os01t0235900-00	Rice	plasma membrane	38.06	35.04
Zm00001d039270_P001	Maize	cytosol	38.06	34.51
Bra023284.1-P	Field mustard	cytosol	28.61	34.33
HORVU3Hr1G057240.1	Barley	cytosol	38.89	34.31
Bra009197.1-P	Field mustard	cytosol	23.06	34.3
KXG31460	Sorghum	cytosol	38.06	34.25
Bra005898.1-P	Field mustard	cytosol, mitochondrion	23.33	34.01
TraesCS3D01G166500.1	Wheat	cytosol	38.06	33.99
TraesCS3B01G189800.1	Wheat	cytosol	38.33	33.99
TraesCS3A01G158800.1	Wheat	cytosol	37.78	33.58
Bra000716.1-P	Field mustard	cytosol	28.06	32.58
Bra020363.1-P	Field mustard	cytosol, plastid	20.56	29.37
Bra008801.1-P	Field mustard	plastid	21.39	28.84
Bra028812.1-P	Field mustard	nucleus	27.5	28.37
Bra006216.1-P	Field mustard	plastid	20.56	28.03
Bra033062.1-P	Field mustard	cytosol	25.0	26.71
Bra004972.1-P	Field mustard	mitochondrion	17.5	25.51
Bra025357.1-P	Field mustard	cytosol	26.94	23.6
Bra004971.1-P	Field mustard	plastid	15.83	22.53
Bra039044.1-P	Field mustard	cytosol	26.39	22.51
Bra025638.1-P	Field mustard	cytosol	25.56	22.44
Bra016941.1-P	Field mustard	plastid	22.5	22.01
Bra028902.1-P	Field mustard	mitochondrion	21.11	21.23
Bra000225.1-P	Field mustard	plastid	23.61	21.2
Bra007299.1-P	Field mustard	plastid	23.06	21.01
Bra014646.1-P	Field mustard	plastid	21.94	20.1

Protein Annotations

MapMan:20.5.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra040917	EnsemblPlants:Bra040917.1	EnsemblPlants:Bra040917.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005884
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009902	GO:GO:0009987
GO:GO:0015035	GO:GO:0016043	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0051017
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4FII8	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF61	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000253EA64	SEG:seg

Description

AT1G64500 (E=6e-167) | glutaredoxin family protein

Coordinates

chrScaffold000311:-:16534..17616

Molecular Weight (calculated)

39587.0 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.561

Length

360 amino acids

Sequence
(BLAST)

001: MGCASSKQVK GNVVSDVYKP PPSSFAVFNI NSIEEPWLKF DHDDDEKPSS AAVPIAVEEG DDDAPKTWDE VSKSLEIHLK PADVKPAEVV SVEPPATPPR
101: RLPRKSASFH TLDELETKAR KQIAAQNPAT TVKLKKTESM SELRPEFNRN ESTQSNSGPR SVKENIFVLR DRERREKEGN KKPVMNWDPL REFPEKCPPG
201: GGDGLVVYTT SLQGVRRTYE DCMRVRAIME QQGVVVDERD VSLDAGVLSE LKELLQDEAT VAPPRVFVKG RYLGGAAEVT AMNENGKLGR VLRWARVERV
301: GEEGRHTCEG CGGARWVPCL ECGGSCKVAA VGVAAKGEGW GRCVKCNENG LIRCPVCFVN

Best Arabidopsis Sequence Match ( AT1G64500.1 )
(BLAST)

001: MGCTSSKQAK ANVVADVYKP PPSSFAVFDV NAIQEPWLKF EHEDDEKPPR STVFDRLDED DDDDDDDGDD APKTWEEVSK SLETKLKPAA VKPPEVDSVK
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN

Arabidopsis Description

F1N19.7 [Source:UniProtKB/TrEMBL;Acc:Q9SGW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.