Factsheet for PGSC0003DMT400031969

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g082590.2.1	Tomato	cytosol	92.58	92.11
VIT_02s0025g01710.t01	Wine grape	cytosol	56.27	58.2
KRH60067	Soybean	cytosol	48.59	56.38
Bra040917.1-P	Field mustard	cytosol	43.99	47.78
CDY47842	Canola	cytosol	43.99	47.78
CDY62024	Canola	cytosol	43.99	47.78
AT1G64500.1	Thale cress	cytosol	42.46	45.11
GSMUA_Achr10P...	Banana	cytosol	40.15	42.2
Zm00001d039270_P001	Maize	cytosol	36.83	36.27
TraesCS3D01G166500.1	Wheat	cytosol	37.34	36.23
TraesCS3B01G189800.1	Wheat	cytosol	37.6	36.21
Os01t0235900-00	Rice	plasma membrane	36.06	36.06
HORVU3Hr1G057240.1	Barley	cytosol	37.6	36.03
TraesCS3A01G158800.1	Wheat	cytosol	37.08	35.8
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	20.97	33.61
KXG31460	Sorghum	cytosol	34.27	33.5
PGSC0003DMT400047487	Potato	cytosol	20.97	31.06
PGSC0003DMT400031889	Potato	plastid	24.3	30.35
PGSC0003DMT400078241	Potato	cytosol, plastid	18.41	30.0
PGSC0003DMT400078242	Potato	cytosol, plastid	19.18	29.53
PGSC0003DMT400015465	Potato	cytosol	19.69	28.1
PGSC0003DMT400017853	Potato	cytosol	22.25	26.93
PGSC0003DMT400005022	Potato	cytosol	24.55	26.16
PGSC0003DMT400023120	Potato	cytosol	25.06	24.5
PGSC0003DMT400003335	Potato	cytosol	25.83	24.11
PGSC0003DMT400056766	Potato	cytosol	24.04	23.68
PGSC0003DMT400007648	Potato	cytosol	19.95	19.7
PGSC0003DMT400020985	Potato	cytosol, plastid	20.2	18.2

Protein Annotations

EntrezGene:102606278	MapMan:20.5.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005884	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009902	GO:GO:0009987	GO:GO:0015035	GO:GO:0016043
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0051017	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:IPR002109	UniProt:M1AWL3	PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG400012263	PGSC:PGSC0003DMG400012263	EnsemblPlants:PGSC0003DMT400031969
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF61	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002949A17
RefSeq:XP_006343831.1	SEG:seg	:	:	:	:

Description

Electron transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400012263]

Coordinates

chr8:+:56189099..56191348

Molecular Weight (calculated)

44018.1 Da

IEP (calculated)

5.953

GRAVY (calculated)

-0.767

Length

391 amino acids

Sequence
(BLAST)

001: MGCASSKRIE VAIDVYRPPP TSFAVFDINS IEEPWLKGAN NNTVEEDELD QDELDEDEKP IKIVQPILEK LNSSIDDSPK SWDEVSKALE DLKPTLQNPP
101: PKKSPKKTLL ALPAPPPPPP EAAEDCGGSP KRKIPRKSFS FHTLEELESK LSSKDSQKNN EFKKKDENKK FQKFNKKNDS QIVVHNGEVA HQRTHSDEGY
201: KPVKENIFLL RDKMEREKEG NVPNFIKFNP LSDYPEKCPP RGDDSLVVYT TSLGGVRRTF EDCNKVRLIL ESHRVVFDER DVALHGEFRQ ELKELLGDGE
301: DTGVPRLFVK GRYIGGVEEV VHLNETKRLG RILNWARVER GVGRLGCEGC GGARFVPCFD CGGSCKVVNG DIKERCPECN ENGLIHCPIC N

Best Arabidopsis Sequence Match ( AT1G64500.1 )
(BLAST)

001: MGCTSSKQAK ANVVADVYKP PPSSFAVFDV NAIQEPWLKF EHEDDEKPPR STVFDRLDED DDDDDDDGDD APKTWEEVSK SLETKLKPAA VKPPEVDSVK
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN

Arabidopsis Description

F1N19.7 [Source:UniProtKB/TrEMBL;Acc:Q9SGW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.