Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g078380.1.1 | Tomato | cytosol | 95.45 | 96.55 |
| PGSC0003DMT400015465 | Potato | cytosol | 67.8 | 65.33 |
| VIT_13s0019g00340.t01 | Wine grape | plastid | 54.55 | 53.73 |
| CDY67732 | Canola | plastid | 50.76 | 51.74 |
| CDX78539 | Canola | cytosol, plastid | 51.14 | 51.53 |
| Bra006216.1-P | Field mustard | plastid | 51.52 | 51.52 |
| KRH62918 | Soybean | cytosol, plastid | 49.62 | 50.97 |
| CDY70634 | Canola | plastid | 51.52 | 50.94 |
| Bra008801.1-P | Field mustard | plastid | 51.52 | 50.94 |
| CDX70521 | Canola | plastid | 51.52 | 50.75 |
| KRH20755 | Soybean | plastid | 51.89 | 50.55 |
| AT5G13810.1 | Thale cress | plastid | 50.76 | 48.91 |
| KRH13399 | Soybean | plastid | 48.86 | 48.31 |
| PGSC0003DMT400078241 | Potato | cytosol, plastid | 34.85 | 38.33 |
| PGSC0003DMT400078242 | Potato | cytosol, plastid | 35.98 | 37.4 |
| PGSC0003DMT400054970 | Potato | cytosol, mitochondrion | 28.41 | 30.74 |
| PGSC0003DMT400007648 | Potato | cytosol | 41.67 | 27.78 |
| PGSC0003DMT400017853 | Potato | cytosol | 32.58 | 26.63 |
| PGSC0003DMT400031889 | Potato | plastid | 30.68 | 25.88 |
| PGSC0003DMT400020985 | Potato | cytosol, plastid | 42.42 | 25.81 |
| PGSC0003DMT400056766 | Potato | cytosol | 34.85 | 23.17 |
| PGSC0003DMT400005022 | Potato | cytosol | 30.3 | 21.8 |
| PGSC0003DMT400023120 | Potato | cytosol | 32.95 | 21.75 |
| PGSC0003DMT400031969 | Potato | cytosol | 31.06 | 20.97 |
| PGSC0003DMT400003335 | Potato | cytosol | 32.95 | 20.76 |
Protein Annotations
| EntrezGene:102585632 | Gene3D:3.40.30.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | UniProt:M1BKU5 | PFAM:PF00462 | EnsemblPlantsGene:PGSC0003DMG400018451 | PGSC:PGSC0003DMG400018451 | EnsemblPlants:PGSC0003DMT400047487 |
| PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF70 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000296C760 |
| RefSeq:XP_006355140.1 | SEG:seg | : | : | : | : |
Description
Glutaredoxin family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018451]
Coordinates
chr3:+:32045243..32046712
Molecular Weight (calculated)
29786.8 Da
IEP (calculated)
8.903
GRAVY (calculated)
-0.536
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRFRDDEIH KPKSSTMLNR SMTVHNAANP IEFPEKTVYF YPSPPSIERH GSVKKLHTSS LGSSFKGTVK KLCSLFESRK PSNLQPQSPT KPVKSFNSDS
101: RVPSFSDFGC TLPGTEDSVV IYFTSLRGIR RTFEDCYTVR MILKSFRVKI DERDISMDSA YKKELQNVLG QKNVTLPQVF IKGKYVGGAE VIKQLNEVGE
201: LSKLLRGLPL RPPGYTCEGC GDLRFLPCSN CDGSRKYFEE DEGQLRRCPQ CNENGLVRCP LCCS
101: RVPSFSDFGC TLPGTEDSVV IYFTSLRGIR RTFEDCYTVR MILKSFRVKI DERDISMDSA YKKELQNVLG QKNVTLPQVF IKGKYVGGAE VIKQLNEVGE
201: LSKLLRGLPL RPPGYTCEGC GDLRFLPCSN CDGSRKYFEE DEGQLRRCPQ CNENGLVRCP LCCS
001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
Arabidopsis Description
AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.