Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67732 | Canola | plastid | 78.47 | 83.01 |
| CDY70634 | Canola | plastid | 80.29 | 82.4 |
| Bra008801.1-P | Field mustard | plastid | 79.93 | 82.02 |
| Bra006216.1-P | Field mustard | plastid | 78.47 | 81.44 |
| CDX78539 | Canola | cytosol, plastid | 77.37 | 80.92 |
| CDX70521 | Canola | plastid | 78.83 | 80.6 |
| VIT_13s0019g00340.t01 | Wine grape | plastid | 57.3 | 58.58 |
| Solyc11g005270.1.1 | Tomato | cytosol | 40.15 | 57.89 |
| KRH62918 | Soybean | cytosol, plastid | 51.82 | 55.25 |
| KRH13399 | Soybean | plastid | 52.55 | 53.93 |
| KRH20755 | Soybean | plastid | 52.19 | 52.77 |
| Solyc03g078380.1.1 | Tomato | cytosol | 48.91 | 51.34 |
| PGSC0003DMT400047487 | Potato | cytosol | 48.91 | 50.76 |
| PGSC0003DMT400015465 | Potato | cytosol | 49.63 | 49.63 |
| AT5G58530.1 | Thale cress | cytosol, plastid | 32.12 | 32.23 |
| AT2G41330.1 | Thale cress | plastid | 41.61 | 28.36 |
| AT3G57070.1 | Thale cress | plastid | 41.97 | 27.58 |
| AT5G06470.1 | Thale cress | cytosol, mitochondrion | 23.72 | 27.2 |
| AT1G32760.1 | Thale cress | plastid | 28.83 | 25.16 |
| AT3G11773.2 | Thale cress | cytosol | 17.88 | 24.5 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 31.75 | 22.31 |
| AT3G28850.1 | Thale cress | cytosol | 33.58 | 21.5 |
| AT4G10630.1 | Thale cress | cytosol | 25.91 | 21.26 |
| AT5G03870.1 | Thale cress | cytosol | 28.47 | 20.31 |
| AT1G64500.1 | Thale cress | cytosol | 26.28 | 19.57 |
| AT5G01420.1 | Thale cress | cytosol | 25.55 | 17.46 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | EntrezGene:831226 | UniProt:A0A178UGU3 | ProteinID:AED91944.1 | ArrayExpress:AT5G13810 |
| EnsemblPlantsGene:AT5G13810 | RefSeq:AT5G13810 | TAIR:AT5G13810 | RefSeq:AT5G13810-TAIR-G | EnsemblPlants:AT5G13810.1 | TAIR:AT5G13810.1 |
| EMBL:AY039854 | EMBL:AY060545 | EMBL:AY084998 | ProteinID:BAB11109.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 |
| InterPro:Glutaredoxin | InterPro:IPR002109 | RefSeq:NP_196885.1 | ProteinID:OAO92387.1 | PFAM:PF00462 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF84 | UniProt:Q9FFZ0 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI00000A7878 | SEG:seg | : | : |
Description
AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
Coordinates
chr5:+:4455148..4457019
Molecular Weight (calculated)
30666.1 Da
IEP (calculated)
9.326
GRAVY (calculated)
-0.334
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.