Factsheet for Bra023284.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93821	Canola	cytosol	84.0	96.92
CDY01245	Canola	cytosol	82.33	95.37
AT1G32760.1	Thale cress	plastid	75.0	71.66
Bra000716.1-P	Field mustard	cytosol	65.33	63.23
KRH41800	Soybean	cytosol	54.33	60.37
VIT_02s0025g02700.t01	Wine grape	cytosol	56.0	54.37
Bra005786.1-P	Field mustard	cytosol	19.67	54.13
Solyc08g083270.1.1	Tomato	cytosol	51.67	47.4
PGSC0003DMT400031889	Potato	plastid	48.0	46.01
TraesCS1A01G103100.1	Wheat	cytosol	42.67	42.11
TraesCS1D01G095500.1	Wheat	cytosol	43.0	42.02
TraesCS1B01G114500.1	Wheat	cytosol	43.0	41.75
Zm00001d054094_P001	Maize	cytosol	43.33	41.67
HORVU1Hr1G021100.2	Barley	cytosol	42.67	41.16
Bra002640.1-P	Field mustard	cytosol	16.0	40.68
KXG29248	Sorghum	cytosol	42.67	38.91
Bra005898.1-P	Field mustard	cytosol, mitochondrion	29.0	35.22
Bra009197.1-P	Field mustard	cytosol	28.0	34.71
Bra028812.1-P	Field mustard	nucleus	38.33	32.95
Os02t0102000-00	Rice	cytosol	34.33	31.99
Bra020363.1-P	Field mustard	cytosol, plastid	24.33	28.97
Bra040917.1-P	Field mustard	cytosol	34.33	28.61
Bra008801.1-P	Field mustard	plastid	24.33	27.34
Bra006216.1-P	Field mustard	plastid	23.67	26.89
Bra004972.1-P	Field mustard	mitochondrion	22.0	26.72
Bra028902.1-P	Field mustard	mitochondrion	31.33	26.26
Bra033062.1-P	Field mustard	cytosol	29.0	25.82
Bra016941.1-P	Field mustard	plastid	31.0	25.27
Bra004971.1-P	Field mustard	plastid	21.0	24.9
Bra007299.1-P	Field mustard	plastid	31.0	23.54
Bra025638.1-P	Field mustard	cytosol	32.0	23.41
Bra014646.1-P	Field mustard	plastid	30.0	22.9
Bra000225.1-P	Field mustard	plastid	30.33	22.69
Bra025357.1-P	Field mustard	cytosol	31.0	22.63
Bra039044.1-P	Field mustard	cytosol	31.33	22.27

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra023284	EnsemblPlants:Bra023284.1	EnsemblPlants:Bra023284.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4E3D3	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF79	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000254226D	SEG:seg

Description

AT1G32760 (E=1e-089) | glutaredoxin family protein

Coordinates

chrA09:-:19940191..19941093

Molecular Weight (calculated)

32435.8 Da

IEP (calculated)

5.065

GRAVY (calculated)

-0.231

Length

300 amino acids

Sequence
(BLAST)

001: MGCVSSNLLS QSDDFSQLAV CHHHLVQLTS STYGLLNLDP PPPPSSSVIS APATPMTPPE RFTFVGKEPI TVKSEPEVIN FWELMSGTCR FSPLPVKRNV
101: SSGGVNKENS DPNWKNPGTQ SNNDAVLKPL DPKIAEEEPE KLCPPGDGGD NRVVIYTTSL RGVRRTFDAC NAVRAAIESF GVVICERDIS MDRGFREELT
201: SLMSGESVLP PRVFVKGRYI GGVEEVMNLV EEGMLRDLLR GIPRRKDRGG GCDGCGGLSF LPCSECNGSC KVVDGWGSDV VVVRCNKCNE NGLVLCPICS

Best Arabidopsis Sequence Match ( AT1G32760.1 )
(BLAST)

001: MGGCVSSNLL TPTDDSSFSH LTSSSLSQHF VKLTSTTYGL LNLDSSSPSP PSPSSSSSAK SVITPMTPPE RFTINGKEAA MMMVKSEPTT EVINFWELMS
101: GLDGDTCRFS PIPVKCNGFS GGLKKENSDP NLKNPNDYEV LKPLDPKLAE ESERLCDGGE NRVVIYTTSL RGVRRTFEAC NAVRAAIESF GVVVCERDVS
201: MDRGFREELS NLMAVESTAA VLPPRVFVKG KYIGGAEEVM RLVEEGLLGE LLKEIPRKKD RCGGGCGGCG GLAFLPCSGC NGSCKVVEGW GNDAVVVKCK
301: ECNENGLVRC PICS

Arabidopsis Description

At1g32760 [Source:UniProtKB/TrEMBL;Acc:Q9LPI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.