Factsheet for Bra020363.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023148.1-P
Bra039871.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	Bra023148.1-P	AT1G30860.1	21798944
AT5G58530.1	Bra039871.1-P	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32696	Canola	cytosol, plastid	97.62	98.01
Bra002640.1-P	Field mustard	cytosol	36.9	78.81
AT5G58530.1	Thale cress	cytosol, plastid	76.98	71.06
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	53.17	54.47
PGSC0003DMT400078241	Potato	cytosol, plastid	47.22	49.58
PGSC0003DMT400078242	Potato	cytosol, plastid	49.21	48.82
Solyc06g082180.1.1	Tomato	cytosol, plastid	49.21	48.82
KRH30192	Soybean	plastid	43.25	47.19
GSMUA_Achr6P32840_001	Banana	cytosol	43.25	46.78
KRH72724	Soybean	plastid	51.98	46.62
KRG98239	Soybean	plastid	42.86	45.76
Zm00001d012471_P001	Maize	cytosol, plastid	20.63	45.22
GSMUA_Achr5P14280_001	Banana	plastid	40.48	44.54
KRH17081	Soybean	plastid	52.78	44.04
GSMUA_Achr5P29410_001	Banana	mitochondrion	39.68	43.29
GSMUA_Achr6P23380_001	Banana	mitochondrion	40.08	42.98
Bra005786.1-P	Field mustard	cytosol	18.25	42.2
EES18035	Sorghum	mitochondrion	39.68	41.67
GSMUA_Achr4P18760_001	Banana	plastid	38.49	41.1
TraesCS3A01G349200.1	Wheat	plastid	40.08	40.73
HORVU3Hr1G087930.1	Barley	plastid	39.68	40.32
TraesCS3D01G343100.1	Wheat	plastid	40.08	40.24
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	39.68	40.16
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	38.1	39.83
TraesCS1A01G222600.1	Wheat	mitochondrion	36.51	39.83
TraesCS1D01G224200.1	Wheat	mitochondrion	36.51	39.83
TraesCS1B01G235900.1	Wheat	mitochondrion	36.11	39.39
Zm00001d010594_P001	Maize	plastid	38.89	39.36
Zm00001d038018_P001	Maize	mitochondrion	37.3	39.33
Os01t0829400-01	Rice	mitochondrion	39.68	39.22
EES19677	Sorghum	plastid	40.08	38.26
KXG33640	Sorghum	mitochondrion	40.08	38.11
Zm00001d010509_P001	Maize	mitochondrion	37.3	38.06
GSMUA_Achr7P18270_001	Banana	mitochondrion	38.89	37.69
Bra004972.1-P	Field mustard	mitochondrion	36.11	36.84
Os05t0471350-00	Rice	mitochondrion, plastid	36.9	36.19
Bra008801.1-P	Field mustard	plastid	37.3	35.21
Bra006216.1-P	Field mustard	plastid	36.51	34.85
Bra004971.1-P	Field mustard	plastid	34.52	34.39
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	34.13	34.26
Zm00001d043006_P001	Maize	plastid	38.89	33.91
HORVU1Hr1G070570.1	Barley	plastid	34.92	33.72
TraesCS1D01G294800.1	Wheat	plastid	33.33	33.47
Zm00001d038445_P001	Maize	cytosol	36.51	33.21
TraesCS1A01G296500.1	Wheat	mitochondrion	33.33	33.2
Os10t0343900-01	Rice	cytosol	16.67	31.82
OQU81447	Sorghum	plastid	23.41	31.22
Bra009197.1-P	Field mustard	cytosol	28.97	30.17
HORVU7Hr1G076170.1	Barley	plastid	25.79	29.28
Os05t0353600-00	Rice	plastid	38.89	29.25
Solyc06g082170.2.1	Tomato	cytosol, plastid	47.22	28.67
Bra005898.1-P	Field mustard	cytosol, mitochondrion	27.78	28.34
Bra023284.1-P	Field mustard	cytosol	28.97	24.33
Bra000716.1-P	Field mustard	cytosol	29.37	23.87
Bra033062.1-P	Field mustard	cytosol	30.16	22.55
Bra016941.1-P	Field mustard	plastid	32.54	22.28
Bra028812.1-P	Field mustard	nucleus	30.56	22.06
Bra007299.1-P	Field mustard	plastid	32.94	21.01
Bra014646.1-P	Field mustard	plastid	32.14	20.61
Bra040917.1-P	Field mustard	cytosol	29.37	20.56
Bra000225.1-P	Field mustard	plastid	32.14	20.2
Bra025357.1-P	Field mustard	cytosol	31.75	19.46
Bra025638.1-P	Field mustard	cytosol	30.95	19.02
Bra028902.1-P	Field mustard	mitochondrion	26.98	18.99
Bra039044.1-P	Field mustard	cytosol	30.56	18.25

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra020363	EnsemblPlants:Bra020363.1	EnsemblPlants:Bra020363.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4DV20	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF201	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002543001	SEG:seg

Description

AT5G58530 (E=7e-098) | glutaredoxin family protein

Coordinates

chrA02:-:6411028..6411786

Molecular Weight (calculated)

28501.1 Da

IEP (calculated)

8.893

GRAVY (calculated)

-0.388

Length

252 amino acids

Sequence
(BLAST)

001: MWRPWRKSSV KTHKTYSPTA SFSFKDVHHL CTDDSSSLPS SPSLSRVLHR VCTANLILRS WPTPPSNHLL RADSEPVTLR RNHEPDVIRI SIPGAESSIV
101: VYFTSLRVVR PTFEDCRAVT TILRTFPVRI DERDLSMDAS YAAELERIFF GGKKDIPKLP RVFIGGRYVG GAEEVIQLHE TGELKKLVQE LPRVERGVCE
201: MCGGYRFVPC NDCHGSHKVY TEKLGFRTCS TCNENGLVRC SSCSYSRHRP SS

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.