Factsheet for HORVU3Hr1G087930.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G048520.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	HORVU2Hr1G048520.1	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G349200.1	Wheat	plastid	93.15	93.15
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	93.15	92.77
TraesCS3D01G343100.1	Wheat	plastid	92.74	91.63
Zm00001d012471_P001	Maize	cytosol, plastid	39.11	84.35
Os01t0829400-01	Rice	mitochondrion	81.05	78.82
KXG33640	Sorghum	mitochondrion	81.05	75.85
Zm00001d043006_P001	Maize	plastid	79.44	68.17
Os10t0343900-01	Rice	cytosol	35.08	65.91
GSMUA_Achr5P29410_001	Banana	mitochondrion	52.82	56.71
GSMUA_Achr5P14280_001	Banana	plastid	49.19	53.28
GSMUA_Achr4P18760_001	Banana	plastid	49.6	52.12
HORVU1Hr1G070570.1	Barley	plastid	53.23	50.57
HORVU7Hr1G076170.1	Barley	plastid	43.55	48.65
GSMUA_Achr6P32840_001	Banana	cytosol	45.16	48.07
GSMUA_Achr7P18270_001	Banana	mitochondrion	49.6	47.31
GSMUA_Achr6P23380_001	Banana	mitochondrion	44.76	47.23
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	43.95	45.23
OQU81447	Sorghum	plastid	33.87	44.44
Bra002640.1-P	Field mustard	cytosol	20.97	44.07
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	43.55	43.9
CDX74801	Canola	cytosol	29.44	43.71
KRG97693	Soybean	plastid	39.52	42.79
KRH31178	Soybean	plastid	39.11	42.36
KRH30192	Soybean	plastid	39.11	41.99
PGSC0003DMT400078241	Potato	cytosol, plastid	40.32	41.67
KRG98239	Soybean	plastid	39.11	41.1
PGSC0003DMT400078242	Potato	cytosol, plastid	41.94	40.94
KRH14919	Soybean	plastid	39.92	40.91
Solyc06g082180.1.1	Tomato	cytosol, plastid	41.53	40.55
Bra020363.1-P	Field mustard	cytosol, plastid	40.32	39.68
CDY59509	Canola	cytosol, plastid	39.92	39.29
CDY32696	Canola	cytosol, plastid	38.71	38.25
VIT_13s0067g01650.t01	Wine grape	plastid	43.15	36.39
KRH72724	Soybean	plastid	40.73	35.94
AT5G58530.1	Thale cress	cytosol, plastid	39.11	35.53
CDY32794	Canola	peroxisome	37.1	35.52
HORVU7Hr1G043870.1	Barley	cytosol	10.89	35.06
CDY18861	Canola	mitochondrion	34.27	34.55
KRH17081	Soybean	plastid	41.94	34.44
Bra004972.1-P	Field mustard	mitochondrion	34.27	34.41
CDX74802	Canola	cytosol, mitochondrion	33.87	34.01
KRH73271	Soybean	plastid	39.52	32.56
Bra004971.1-P	Field mustard	plastid	32.66	32.02
HORVU4Hr1G075190.2	Barley	mitochondrion	31.45	23.85
HORVU2Hr1G059940.1	Barley	mitochondrion	25.81	23.7
Solyc06g082170.2.1	Tomato	cytosol, plastid	39.52	23.61
HORVU0Hr1G017160.1	Barley	mitochondrion	35.48	23.16
HORVU1Hr1G021100.2	Barley	cytosol	27.82	22.19
HORVU7Hr1G038000.2	Barley	cytosol, plastid	36.29	21.28
HORVU5Hr1G092580.1	Barley	cytosol	19.35	19.83
HORVU2Hr1G115200.2	Barley	cytosol	32.66	17.57
HORVU2Hr1G073040.1	Barley	cytosol	28.23	16.67
HORVU3Hr1G057240.1	Barley	cytosol	27.02	16.42

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EMBL:AK353648	EMBL:AK374785	UniProt:F2CPU6	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	EnsemblPlantsGene:HORVU3Hr1G087930	EnsemblPlants:HORVU3Hr1G087930.1	InterPro:IPR002109	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF75	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002004467
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CPU6]

Coordinates

chrchr3H:-:622980884..622982496

Molecular Weight (calculated)

26610.9 Da

IEP (calculated)

10.186

GRAVY (calculated)

-0.244

Length

248 amino acids

Sequence
(BLAST)

001: MWLPWVKTRS TSPTTSSSSS TSTCSSTALT AASPRLSFNS PSLKDLQALL RSDPAAPSPS PPHTAPRSAR VFHRVRVAAS ALRALRTLQA PPPAAEADRR
101: VVLYYTSLHV IRGTYEDCRA ARAILRGLRA SVDERDLAMD ARYLEELTAL LPRARRITLP QVFVGGRHLG GAEELRRLHE SGELRRVVAG AASLAACGRC
201: GGERYVLCGS CDGSHKRYSL KGGGGFRTCA GCNENGLVRC PDCSPPVV

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.