Factsheet for VIT_13s0067g01650.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	50.0	59.76
PGSC0003DMT400078241	Potato	cytosol, plastid	43.54	53.33
Solyc06g082180.1.1	Tomato	cytosol, plastid	44.56	51.57
PGSC0003DMT400078242	Potato	cytosol, plastid	43.88	50.79
GSMUA_Achr6P32840_001	Banana	cytosol	38.78	48.93
Zm00001d012471_P001	Maize	cytosol, plastid	19.05	48.7
GSMUA_Achr5P29410_001	Banana	mitochondrion	36.73	46.75
GSMUA_Achr6P23380_001	Banana	mitochondrion	37.07	46.38
Zm00001d010594_P001	Maize	plastid	38.1	44.98
GSMUA_Achr4P18760_001	Banana	plastid	36.05	44.92
GSMUA_Achr5P14280_001	Banana	plastid	34.69	44.54
TraesCS3A01G349200.1	Wheat	plastid	37.41	44.35
EES19677	Sorghum	plastid	39.8	44.32
TraesCS3D01G343100.1	Wheat	plastid	37.41	43.82
VIT_08s0032g01030.t01	Wine grape	cytosol	27.21	43.72
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	36.73	43.37
HORVU3Hr1G087930.1	Barley	plastid	36.39	43.15
Os05t0471350-00	Rice	mitochondrion, plastid	37.07	42.41
Os01t0829400-01	Rice	mitochondrion	36.39	41.96
EES18035	Sorghum	mitochondrion	34.01	41.67
GSMUA_Achr7P18270_001	Banana	mitochondrion	36.39	41.15
KXG33640	Sorghum	mitochondrion	36.73	40.75
TraesCS1B01G235900.1	Wheat	mitochondrion	31.97	40.69
TraesCS1D01G224200.1	Wheat	mitochondrion	31.97	40.69
TraesCS1A01G222600.1	Wheat	mitochondrion	31.97	40.69
Zm00001d038018_P001	Maize	mitochondrion	32.99	40.59
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	32.65	39.83
VIT_08s0007g05530.t01	Wine grape	cytosol	32.99	39.59
HORVU1Hr1G070570.1	Barley	plastid	34.69	39.08
Zm00001d010509_P001	Maize	mitochondrion	32.65	38.87
Zm00001d038445_P001	Maize	cytosol	35.71	37.91
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	31.97	37.45
TraesCS1D01G294800.1	Wheat	plastid	31.97	37.45
VIT_13s0019g00340.t01	Wine grape	plastid	33.67	36.94
TraesCS1A01G296500.1	Wheat	mitochondrion	31.63	36.76
Zm00001d043006_P001	Maize	plastid	35.37	35.99
Os10t0343900-01	Rice	cytosol	15.99	35.61
OQU81447	Sorghum	plastid	20.75	32.28
HORVU7Hr1G076170.1	Barley	plastid	23.47	31.08
Solyc06g082170.2.1	Tomato	cytosol, plastid	43.2	30.6
Os05t0353600-00	Rice	plastid	33.67	29.55
VIT_02s0025g02700.t01	Wine grape	cytosol	27.21	25.89
VIT_13s0073g00520.t01	Wine grape	cytosol	27.21	21.28
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	31.63	20.67
VIT_02s0025g01710.t01	Wine grape	cytosol	26.53	20.63
VIT_08s0007g03220.t01	Wine grape	cytosol	25.51	18.84

Protein Annotations

EntrezGene:100255220	wikigene:100255220	Gene3D:3.40.30.10	MapMan:35.1	ProteinID:CCB49838	ProteinID:CCB49838.1
UniProt:F6HC84	EMBL:FN595514	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109
EntrezGene:LOC100255220	wikigene:LOC100255220	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF197
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002107F03	ArrayExpress:VIT_13s0067g01650	EnsemblPlantsGene:VIT_13s0067g01650	EnsemblPlants:VIT_13s0067g01650.t01
RefSeq:XP_002276361	RefSeq:XP_002276361.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr13:-:925550..927969

Molecular Weight (calculated)

32630.4 Da

IEP (calculated)

9.143

GRAVY (calculated)

-0.249

Length

294 amino acids

Sequence
(BLAST)

001: MWRSWVSSSG GVQTAPASYK NFTCSSFKDI QSLCKEENHC SSNLKRPSIF HRVRVVTSVL RNWSSTQTNP EPNPKPEPAP PQPCVSLTGG DQSVVVYFTS
101: LRVVRKTFED CSTVRSILRG FRVKVDERDL SMDAGFLDEL KGILGRKKLS LPRVFIGGRY VGGAEEIRQL HETGELKKLL GGFPVAAGVC DECGGYRFML
201: CENCDGSRKV YSEKTGFRIC TACNENGLIR CPSCSREHFY KAIVIRKFAL KVSFKSTPMG LHPLEFSCII VFDLARGTEG MRACRKLVGA GETS

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.