Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr4P33210_001 | |
| GSMUA_Achr7P00390_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58530.1 | GSMUA_Achr4P33210_001 | AT1G30860.1 | 21798944 |
| AT5G58530.1 | GSMUA_Achr7P00390_001 | AT1G30860.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P29410_001 | Banana | mitochondrion | 77.12 | 78.79 |
| GSMUA_Achr5P14280_001 | Banana | plastid | 74.58 | 76.86 |
| Os01t0829400-01 | Rice | mitochondrion | 55.51 | 51.37 |
| Zm00001d012471_P001 | Maize | cytosol, plastid | 25.0 | 51.3 |
| TraesCS3A01G349200.1 | Wheat | plastid | 53.81 | 51.21 |
| TraesCS3B01G381400.1 | Wheat | mitochondrion, plastid | 53.39 | 50.6 |
| TraesCS3D01G343100.1 | Wheat | plastid | 53.81 | 50.6 |
| KXG33640 | Sorghum | mitochondrion | 55.93 | 49.81 |
| GSMUA_Achr6P32840_001 | Banana | cytosol | 49.15 | 49.79 |
| HORVU3Hr1G087930.1 | Barley | plastid | 52.12 | 49.6 |
| EES18035 | Sorghum | mitochondrion | 49.58 | 48.75 |
| Os05t0471350-00 | Rice | mitochondrion, plastid | 52.97 | 48.64 |
| Zm00001d010594_P001 | Maize | plastid | 51.27 | 48.59 |
| Zm00001d038018_P001 | Maize | mitochondrion | 47.88 | 47.28 |
| TraesCS1B01G235900.1 | Wheat | mitochondrion | 46.19 | 47.19 |
| TraesCS1A01G222600.1 | Wheat | mitochondrion | 46.19 | 47.19 |
| EES19677 | Sorghum | plastid | 52.54 | 46.97 |
| TraesCS1D01G224200.1 | Wheat | mitochondrion | 45.76 | 46.75 |
| VIT_06s0004g07040.t01 | Wine grape | cytosol, mitochondrion | 47.46 | 45.53 |
| HORVU1Hr1G060210.1 | Barley | mitochondrion, plastid | 46.19 | 45.23 |
| GSMUA_Achr6P23380_001 | Banana | mitochondrion | 44.92 | 45.11 |
| GSMUA_Achr7P18270_001 | Banana | mitochondrion | 49.58 | 45.0 |
| Zm00001d010509_P001 | Maize | mitochondrion | 47.03 | 44.94 |
| Bra002640.1-P | Field mustard | cytosol | 22.46 | 44.92 |
| CDX74801 | Canola | cytosol | 31.78 | 44.91 |
| KRH30192 | Soybean | plastid | 43.64 | 44.59 |
| Zm00001d043006_P001 | Maize | plastid | 54.24 | 44.29 |
| HORVU1Hr1G070570.1 | Barley | plastid | 48.31 | 43.68 |
| GSMUA_Achr8P22080_001 | Banana | cytosol | 36.44 | 43.65 |
| KRG98239 | Soybean | plastid | 43.64 | 43.64 |
| TraesCS1D01G294800.1 | Wheat | plastid | 45.76 | 43.03 |
| Zm00001d038445_P001 | Maize | cytosol | 50.42 | 42.96 |
| TraesCS1B01G305600.1 | Wheat | mitochondrion, plastid | 45.34 | 42.63 |
| PGSC0003DMT400078242 | Potato | cytosol, plastid | 45.76 | 42.52 |
| Solyc06g082180.1.1 | Tomato | cytosol, plastid | 45.76 | 42.52 |
| KRH14919 | Soybean | plastid | 43.22 | 42.15 |
| PGSC0003DMT400078241 | Potato | cytosol, plastid | 42.8 | 42.08 |
| TraesCS1A01G296500.1 | Wheat | mitochondrion | 44.92 | 41.9 |
| KRH31178 | Soybean | plastid | 40.25 | 41.48 |
| KRG97693 | Soybean | plastid | 39.41 | 40.61 |
| GSMUA_Achr8P09670_001 | Banana | cytosol | 35.17 | 40.49 |
| Os10t0343900-01 | Rice | cytosol | 22.46 | 40.15 |
| CDY59509 | Canola | cytosol, plastid | 41.53 | 38.89 |
| Bra020363.1-P | Field mustard | cytosol, plastid | 41.1 | 38.49 |
| CDY32696 | Canola | cytosol, plastid | 40.68 | 38.25 |
| CDY32794 | Canola | peroxisome | 41.95 | 38.22 |
| OQU81447 | Sorghum | plastid | 30.08 | 37.57 |
| KRH72724 | Soybean | plastid | 44.49 | 37.37 |
| AT5G58530.1 | Thale cress | cytosol, plastid | 43.22 | 37.36 |
| VIT_13s0067g01650.t01 | Wine grape | plastid | 44.92 | 36.05 |
| Bra004972.1-P | Field mustard | mitochondrion | 37.29 | 35.63 |
| CDX74802 | Canola | cytosol, mitochondrion | 36.86 | 35.22 |
| CDY18861 | Canola | mitochondrion | 36.44 | 34.96 |
| Os05t0353600-00 | Rice | plastid | 49.58 | 34.93 |
| KRH17081 | Soybean | plastid | 44.07 | 34.44 |
| KRH73271 | Soybean | plastid | 43.22 | 33.89 |
| HORVU7Hr1G076170.1 | Barley | plastid | 30.51 | 32.43 |
| Bra004971.1-P | Field mustard | plastid | 34.75 | 32.41 |
| GSMUA_Achr2P20360_001 | Banana | cytosol | 30.93 | 26.55 |
| GSMUA_Achr8P24180_001 | Banana | cytosol | 37.71 | 25.5 |
| GSMUA_Achr3P01620_001 | Banana | mitochondrion | 37.29 | 24.93 |
| GSMUA_Achr6P13210_001 | Banana | cytosol | 28.81 | 24.64 |
| GSMUA_Achr6P03120_001 | Banana | cytosol, mitochondrion | 29.66 | 23.41 |
| Solyc06g082170.2.1 | Tomato | cytosol, plastid | 41.1 | 23.37 |
| GSMUA_Achr4P00540_001 | Banana | mitochondrion | 36.86 | 22.14 |
| GSMUA_Achr10P... | Banana | cytosol | 30.08 | 19.09 |
| GSMUA_Achr7P20960_001 | Banana | mitochondrion, nucleus | 30.93 | 18.07 |
| GSMUA_Achr6P18300_001 | Banana | cytosol | 29.24 | 17.69 |
| GSMUA_Achr9P02540_001 | Banana | cytosol | 28.81 | 17.35 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr4G18760_001 | EnsemblPlants:GSMUA_Achr4P18760_001 |
| EnsemblPlants:GSMUA_Achr4T18760_001 | InterPro:Glutaredoxin | InterPro:IPR002109 | UniProt:M0SQ39 | PFAM:PF00462 | PFscan:PS51354 |
| PANTHER:PTHR10168 | PANTHER:PTHR10168:SF197 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000296ED19 | SEG:seg |
Description
glutaredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G18760_001]
Coordinates
chr4:+:19753532..19754242
Molecular Weight (calculated)
25611.9 Da
IEP (calculated)
8.880
GRAVY (calculated)
-0.065
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MWPPWVKATP SSTATGATCR SPTFSSPTLK DIQALLRDDP HQPLACPALR RVIHRARLAS SALRALRSAF ASAAPSSDPL DRRRHGLVLY FTSLRIVRRT
101: FEDCRVVRSI LRGLRVAVDE RDLSMDSRFL AELQVALGCR QPTLPKLFLA GRCLGGADEI RLLHESGELK ALVDGIASLP PSASDCEACS GVRFVLCAAC
201: SGSHKRYSDK TGGFRTCGEC NENGLVRCPD CFAAAL
101: FEDCRVVRSI LRGLRVAVDE RDLSMDSRFL AELQVALGCR QPTLPKLFLA GRCLGGADEI RLLHESGELK ALVDGIASLP PSASDCEACS GVRFVLCAAC
201: SGSHKRYSDK TGGFRTCGEC NENGLVRCPD CFAAAL
001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP
Arabidopsis Description
At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.