CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74802	Canola	cytosol, mitochondrion	91.46	91.09
CDX74801	Canola	cytosol	61.38	90.42
KRG97693	Soybean	plastid	42.68	45.85
KRH14919	Soybean	plastid	43.5	44.21
KRH31178	Soybean	plastid	39.84	42.79
Zm00001d012471_P001	Maize	cytosol, plastid	18.7	40.0
GSMUA_Achr5P29410_001	Banana	mitochondrion	36.99	39.39
CDX80893	Canola	cytosol	17.07	38.53
GSMUA_Achr5P14280_001	Banana	plastid	35.37	37.99
CDY32794	Canola	peroxisome	39.43	37.45
GSMUA_Achr6P23380_001	Banana	mitochondrion	35.37	37.02
GSMUA_Achr6P32840_001	Banana	cytosol	34.96	36.91
CDY11274	Canola	cytosol	16.26	36.7
GSMUA_Achr4P18760_001	Banana	plastid	34.96	36.44
KRH73271	Soybean	plastid	43.5	35.55
CDY32696	Canola	cytosol, plastid	36.18	35.46
CDY00113	Canola	cytosol	19.11	35.34
CDY59509	Canola	cytosol, plastid	36.18	35.32
Os01t0829400-01	Rice	mitochondrion	36.59	35.29
TraesCS3A01G349200.1	Wheat	plastid	35.37	35.08
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	35.37	34.94
TraesCS3D01G343100.1	Wheat	plastid	35.37	34.66
EES19677	Sorghum	plastid	36.99	34.47
HORVU3Hr1G087930.1	Barley	plastid	34.55	34.27
Os05t0471350-00	Rice	mitochondrion, plastid	35.77	34.24
TraesCS1A01G222600.1	Wheat	mitochondrion	32.11	34.2
EES18035	Sorghum	mitochondrion	32.93	33.75
KXG33640	Sorghum	mitochondrion	36.18	33.58
TraesCS1D01G224200.1	Wheat	mitochondrion	31.3	33.33
TraesCS1B01G235900.1	Wheat	mitochondrion	31.3	33.33
Zm00001d010509_P001	Maize	mitochondrion	33.33	33.2
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	32.52	33.2
Zm00001d010594_P001	Maize	plastid	33.33	32.93
Os10t0343900-01	Rice	cytosol	17.48	32.58
GSMUA_Achr7P18270_001	Banana	mitochondrion	34.15	32.31
Zm00001d038018_P001	Maize	mitochondrion	31.3	32.22
Zm00001d038445_P001	Maize	cytosol	34.96	31.05
Zm00001d043006_P001	Maize	plastid	36.18	30.8
HORVU1Hr1G070570.1	Barley	plastid	30.49	28.74
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	29.27	28.69
TraesCS1D01G294800.1	Wheat	plastid	28.86	28.29
TraesCS1A01G296500.1	Wheat	mitochondrion	28.86	28.06
OQU81447	Sorghum	plastid	21.54	28.04
HORVU7Hr1G076170.1	Barley	plastid	25.2	27.93
CDX78539	Canola	cytosol, plastid	29.67	27.86
CDY67732	Canola	plastid	28.86	27.41
CDX70521	Canola	plastid	29.67	27.24
CDY70634	Canola	plastid	29.27	26.97
CDY67834	Canola	cytosol	26.42	26.86
CDX98926	Canola	cytosol	26.02	26.67
CDY14169	Canola	cytosol	26.42	26.53
CDY01245	Canola	cytosol	26.02	24.71
CDX93821	Canola	cytosol	25.61	24.23
Os05t0353600-00	Rice	plastid	32.93	24.18
CDY05109	Canola	cytosol	26.02	24.15
CDX90765	Canola	cytosol	26.02	23.97
CDX81007	Canola	cytosol, mitochondrion	21.14	23.42
CDY55763	Canola	cytosol, mitochondrion	19.51	21.62
CDY04039	Canola	cytosol	28.86	21.07
CDY70277	Canola	cytosol	28.46	20.77
CDX76039	Canola	plastid	29.27	20.51
CDY04902	Canola	nucleus	28.46	20.17
CDY30970	Canola	plastid	30.08	20.11
CDY67051	Canola	cytosol	30.89	20.05
CDY30281	Canola	cytosol	31.3	19.95
CDY14762	Canola	cytosol, plastid	29.27	19.89
CDY06932	Canola	plastid	28.86	19.29
CDY20015	Canola	cytosol	30.89	18.81
CDY06138	Canola	plastid	30.08	18.73
CDY22520	Canola	plastid	30.08	18.45
CDY35418	Canola	plastid	30.08	18.45
CDX72074	Canola	plastid	29.27	18.09
CDX86410	Canola	cytosol	30.08	18.0
CDX85224	Canola	cytosol	30.08	17.87
CDY47842	Canola	cytosol	25.2	17.22
CDY04838	Canola	mitochondrion	24.8	17.04
CDY62024	Canola	cytosol	24.39	16.67
CDX80894	Canola	nucleus	3.25	4.08
CDY11275	Canola	nucleus	3.25	4.04

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078G0N3	UniProt:A0A078G0N3	EnsemblPlants:CDY18861	ProteinID:CDY18861
ProteinID:CDY18861.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00006042001	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF197	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0004EB1008	:	:	:	:	:

Description

BnaC04g04890DBnaC04g04890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0N3]

Coordinates

chrLK032090:-:9001..9741

Molecular Weight (calculated)

28217.8 Da

IEP (calculated)

8.050

GRAVY (calculated)

-0.434

Length

246 amino acids

Sequence
(BLAST)

001: MLWNWFQLRK RRQEVSPDTP KWSSRRFSCS SFKDVNNLLY DDDVPSPELQ VLHQPRSPKI DRCTSRTPPL TRETLYSTDQ GGVVLYYTSL RIVRKTFEEC
101: RAVRAILHRL RIPIDDRDLT MDARFHDELH AIFGTKNVEL PKVFIGGRYI GGADEIKKLN ESGELRKMVG ELPPSDGRFS ENCELCGGWR FVVCERCNGS
201: HKIFLEENGF VNCTVCSVEG LVRCSSCFPI HRTIGDGTMI SPVDLK

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.