Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90765 | Canola | cytosol | 96.6 | 95.88 |
| AT4G10630.1 | Thale cress | cytosol | 81.13 | 64.37 |
| CDX93821 | Canola | cytosol | 61.13 | 62.31 |
| CDY01245 | Canola | cytosol | 60.0 | 61.39 |
| KRH41800 | Soybean | cytosol | 62.26 | 61.11 |
| VIT_02s0025g02700.t01 | Wine grape | cytosol | 58.87 | 50.49 |
| Solyc08g083270.1.1 | Tomato | cytosol | 56.6 | 45.87 |
| CDX80893 | Canola | cytosol | 18.87 | 45.87 |
| CDY11274 | Canola | cytosol | 18.49 | 44.95 |
| PGSC0003DMT400031889 | Potato | plastid | 52.08 | 44.09 |
| CDY14169 | Canola | cytosol | 37.74 | 40.82 |
| Zm00001d054094_P001 | Maize | cytosol | 47.92 | 40.71 |
| TraesCS1A01G103100.1 | Wheat | cytosol | 46.04 | 40.13 |
| TraesCS1D01G095500.1 | Wheat | cytosol | 46.42 | 40.07 |
| TraesCS1B01G114500.1 | Wheat | cytosol | 46.42 | 39.81 |
| HORVU1Hr1G021100.2 | Barley | cytosol | 46.04 | 39.23 |
| CDX74801 | Canola | cytosol | 24.15 | 38.32 |
| KXG29248 | Sorghum | cytosol | 47.55 | 38.3 |
| CDY00113 | Canola | cytosol | 16.23 | 32.33 |
| CDY67834 | Canola | cytosol | 29.43 | 32.23 |
| CDX98926 | Canola | cytosol | 29.06 | 32.08 |
| CDY04902 | Canola | nucleus | 40.38 | 30.84 |
| CDX81007 | Canola | cytosol, mitochondrion | 25.28 | 30.18 |
| CDY55763 | Canola | cytosol, mitochondrion | 24.53 | 29.28 |
| Os02t0102000-00 | Rice | cytosol | 35.47 | 29.19 |
| CDY59509 | Canola | cytosol, plastid | 27.17 | 28.57 |
| CDY32696 | Canola | cytosol, plastid | 26.79 | 28.29 |
| CDY32794 | Canola | peroxisome | 27.17 | 27.8 |
| CDY67732 | Canola | plastid | 26.04 | 26.64 |
| CDX78539 | Canola | cytosol, plastid | 26.04 | 26.34 |
| CDX74802 | Canola | cytosol, mitochondrion | 24.53 | 26.32 |
| CDY70634 | Canola | plastid | 26.42 | 26.22 |
| CDY18861 | Canola | mitochondrion | 24.15 | 26.02 |
| CDX70521 | Canola | plastid | 26.04 | 25.75 |
| CDY04039 | Canola | cytosol | 32.45 | 25.52 |
| CDY47842 | Canola | cytosol | 34.34 | 25.28 |
| CDY06932 | Canola | plastid | 35.09 | 25.27 |
| CDY70277 | Canola | cytosol | 32.08 | 25.22 |
| CDY14762 | Canola | cytosol, plastid | 33.58 | 24.59 |
| CDY62024 | Canola | cytosol | 33.21 | 24.44 |
| CDY04838 | Canola | mitochondrion | 32.45 | 24.02 |
| CDX76039 | Canola | plastid | 30.94 | 23.36 |
| CDY67051 | Canola | cytosol | 32.83 | 22.96 |
| CDY30281 | Canola | cytosol | 33.21 | 22.8 |
| CDY35418 | Canola | plastid | 34.34 | 22.69 |
| CDY22520 | Canola | plastid | 34.34 | 22.69 |
| CDY30970 | Canola | plastid | 30.94 | 22.28 |
| CDY06138 | Canola | plastid | 32.83 | 22.03 |
| CDY20015 | Canola | cytosol | 33.21 | 21.78 |
| CDX72074 | Canola | plastid | 32.45 | 21.61 |
| CDX85224 | Canola | cytosol | 33.58 | 21.5 |
| CDX86410 | Canola | cytosol | 33.21 | 21.41 |
| CDX80894 | Canola | nucleus | 12.45 | 16.84 |
| CDY11275 | Canola | nucleus | 12.45 | 16.67 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:A0A078EWX1 | EnsemblPlants:CDY05109 | ProteinID:CDY05109 | ProteinID:CDY05109.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00119883001 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF79 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0004EEE67A | SEG:seg | : | : | : |
Description
BnaC03g29070D
Coordinates
chrLK031959:-:788281..789210
Molecular Weight (calculated)
28470.1 Da
IEP (calculated)
6.698
GRAVY (calculated)
-0.171
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVSSNLLN HDEDFPQIGG SSAFGHHIVK LTSTTYGLLT LDPPSSPPTT PPQKFTTGTD TKSFLSEPEV INSWELMSEV LKPLDPKPSE RFERICPAGG
101: ENRVVIYTTS LRGVRRTFEE CNAVRAAVEG SGVVICERDV SMDRGFREEL TTLMAKRAGN DKASALPPRV FVKGMYIGGA EEVLRLVEEG VFGEMVRGLP
201: SKKAGGCRRG GYGDGACDGC GSLFFLPCFR CNGSCKVVKG WGSSAVVVRC TECNENGLVP CPICS
101: ENRVVIYTTS LRGVRRTFEE CNAVRAAVEG SGVVICERDV SMDRGFREEL TTLMAKRAGN DKASALPPRV FVKGMYIGGA EEVLRLVEEG VFGEMVRGLP
201: SKKAGGCRRG GYGDGACDGC GSLFFLPCFR CNGSCKVVKG WGSSAVVVRC TECNENGLVP CPICS
001: MGCVSSNLLN HDEDFSQIGG GSSAFGHHIV KLTSTTYGLL TLDPPPPPSP PMTPPEKFTV DTKSKSIWSE PRVIKSEPEI INSWELMSGL DGESFRFTPL
101: PKTPVKYKVF GGENKENSDP SRRNPRKNLN DEVLKPLDLN REDSDSNSRS PRKSFKPLDL KLDEKFERIC PPGGENRVVM YTTSLRGVRQ TFEACNAVRA
201: AVESFGVVVC ERDVSMDRRF REELVSLMAK RVGDEGVAAL PPRVFVKGRY IGGGEEVLRL VEEGSFGELI SGIPRKKAGG CESGACDGCG GLFFLPCFRC
301: NGSCKMVKGW GSASVVVRCN ECNENGLVPC PICS
101: PKTPVKYKVF GGENKENSDP SRRNPRKNLN DEVLKPLDLN REDSDSNSRS PRKSFKPLDL KLDEKFERIC PPGGENRVVM YTTSLRGVRQ TFEACNAVRA
201: AVESFGVVVC ERDVSMDRRF REELVSLMAK RVGDEGVAAL PPRVFVKGRY IGGGEEVLRL VEEGSFGELI SGIPRKKAGG CESGACDGCG GLFFLPCFRC
301: NGSCKMVKGW GSASVVVRCN ECNENGLVPC PICS
Arabidopsis Description
F3H7.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSB9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.