CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016941.1-P	Field mustard	plastid	99.18	99.18
CDY14762	Canola	cytosol, plastid	94.57	96.13
CDY35418	Canola	plastid	78.26	71.82
CDY22520	Canola	plastid	77.72	71.32
AT2G41330.1	Thale cress	plastid	72.83	66.67
CDX76039	Canola	plastid	57.61	60.4
CDY30970	Canola	plastid	58.42	58.42
CDX72074	Canola	plastid	61.96	57.29
CDY06138	Canola	plastid	61.14	56.96
VIT_08s0007g05530.t01	Wine grape	cytosol	36.14	54.29
Solyc04g039900.1.1	Tomato	cytosol, extracellular, nucleus	33.97	45.96
KRG95123	Soybean	plastid	50.27	43.63
CDY11274	Canola	cytosol	12.5	42.2
PGSC0003DMT400007648	Potato	cytosol	43.75	40.66
CDY14169	Canola	cytosol	26.9	40.41
Solyc10g079560.1.1	Tomato	plastid	47.55	40.32
PGSC0003DMT400020985	Potato	cytosol, plastid	47.55	40.32
CDX74801	Canola	cytosol	18.21	40.12
CDY67732	Canola	plastid	27.99	39.77
KRH66801	Soybean	plastid	40.49	39.73
CDY70634	Canola	plastid	28.8	39.7
CDX78539	Canola	cytosol, plastid	28.26	39.69
CDX80893	Canola	cytosol	11.68	39.45
CDX70521	Canola	plastid	27.99	38.43
CDY00113	Canola	cytosol	13.86	38.35
CDX93821	Canola	cytosol	25.0	35.38
CDY05109	Canola	cytosol	25.27	35.09
CDX90765	Canola	cytosol	25.27	34.83
CDY01245	Canola	cytosol	24.18	34.36
CDY59509	Canola	cytosol, plastid	22.28	32.54
CDY32696	Canola	cytosol, plastid	21.74	31.87
CDY70277	Canola	cytosol	28.8	31.45
CDY32794	Canola	peroxisome	22.01	31.27
CDY67051	Canola	cytosol	32.07	31.13
CDY04039	Canola	cytosol	28.26	30.86
CDY30281	Canola	cytosol	32.07	30.57
CDX98926	Canola	cytosol	19.84	30.42
CDY67834	Canola	cytosol	19.84	30.17
CDY04902	Canola	nucleus	28.26	29.97
CDX74802	Canola	cytosol, mitochondrion	20.11	29.96
CDX86410	Canola	cytosol	32.61	29.2
CDX85224	Canola	cytosol	32.61	28.99
CDY18861	Canola	mitochondrion	19.29	28.86
CDY20015	Canola	cytosol	30.43	27.72
CDX81007	Canola	cytosol, mitochondrion	16.3	27.03
CDY55763	Canola	cytosol, mitochondrion	16.03	26.58
CDY47842	Canola	cytosol	22.01	22.5
CDY62024	Canola	cytosol	21.74	22.22
CDY04838	Canola	mitochondrion	21.47	22.07
CDX80894	Canola	nucleus	10.6	19.9
CDY11275	Canola	nucleus	10.33	19.19

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078F1C3	EnsemblPlants:CDY06932	ProteinID:CDY06932	ProteinID:CDY06932.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00123232001	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF70	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EEC934	SEG:seg	:	:	:

Description

BnaA04g23830D

Coordinates

chrLK031974:-:272053..274880

Molecular Weight (calculated)

40736.1 Da

IEP (calculated)

5.205

GRAVY (calculated)

-0.470

Length

368 amino acids

Sequence
(BLAST)

001: MGSSSSKTTS SSCSNSSCSA SRSPPEKKLN ATTVPRAFSF PMPSVHHPPV KKGDTHHLVS LTSTTYGSLL HVDLDVQTLK NNKKTAEQDE SLDSLSPDSV
101: INTWELMNDL EDEFGSMKRD VDVNGSYEFV RMEEDWIPLP SKAKQPLWKH MAEESFLSGL DSNIISSYKR ALSSRQLGKN TKPVSCSHSN QSVVSLSPVS
201: SQALEEQEKP RLLEIEEDNK TIVLYFTSLR GIRKTYEDCC YVRTVLRGFQ VAVEERDISM DSEYRKEVQI LLGEEKPVCL PQVFIRGVHV GGVEEIKRLN
301: DGGELGEMLR GFPVCESLGA CECCGDARFV PCGSCGGSTK VFEEQEDGFK RCSGCNENGL VRCNNCCL

Best Arabidopsis Sequence Match ( AT2G41330.1 )
(BLAST)

001: MGSSVSKTAS SASASSITSI LNSPPETEFN IPSSSVPKAF TFPMPSIHHP PAKKGDTHHF VSLTSTTYGS LVLDDRQTLP HISVSGKSNK KMPETEEARD
101: SFSPDSVINT WELMNDLDDE FDSANSDTSK SNSVVNLDSF SKPITNRDVV INGSAYGSYE DEEDWRLLPF KPKQPLWKHM SEESFLSDLD PNIISSYKRA
201: LSSKQLGKNS SNGHSNHSVL VSLPEYVSSS PLSSQTSEKD QEKPRLLEKE DNENKIVVYF TSLRGIRKTY EDCCCVRAIL RGFQVAVEER DISMDSKYRK
301: ELQNALGEEK PVCLPQVFIR GVRIGGIEEI KILNDGGELA EMLKDFPACE SIGACDSCGD ARFVPCTNCG GSTKVFEEQE DGFKRCNGCN ENGLVRCNKC
401: CL

Arabidopsis Description

At2g41330/F13H10.12 [Source:UniProtKB/TrEMBL;Acc:Q9ZVB8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.