CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67834	Canola	cytosol	98.75	97.93
Bra009197.1-P	Field mustard	cytosol	98.33	97.52
AT5G06470.1	Thale cress	cytosol, mitochondrion	81.67	82.01
CDX81007	Canola	cytosol, mitochondrion	75.0	81.08
CDY55763	Canola	cytosol, mitochondrion	74.58	80.63
VIT_08s0032g01030.t01	Wine grape	cytosol	39.17	51.37
KRH72143	Soybean	mitochondrion	43.33	39.39
KRH32876	Soybean	cytosol	44.17	38.41
KRG96283	Soybean	mitochondrion	40.42	38.19
Zm00001d012904_P001	Maize	cytosol	19.58	37.9
KRH68025	Soybean	cytosol	41.25	37.5
CDX80893	Canola	cytosol	16.67	36.7
CDY00113	Canola	cytosol	19.17	34.59
CDX74801	Canola	cytosol	23.75	34.13
CDY11274	Canola	cytosol	15.42	33.95
Os07t0159900-01	Rice	mitochondrion	35.83	33.59
Zm00001d007885_P001	Maize	mitochondrion	30.42	32.59
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	39.17	31.44
CDY01245	Canola	cytosol	33.33	30.89
CDX93821	Canola	cytosol	32.5	30.0
HORVU2Hr1G059940.1	Barley	mitochondrion	33.33	29.63
TraesCS2A01G249000.1	Wheat	mitochondrion	32.92	29.26
CDX90765	Canola	cytosol	32.5	29.21
EER95886	Sorghum	mitochondrion	33.33	29.2
CDY05109	Canola	cytosol	32.08	29.06
TraesCS2D01G250600.1	Wheat	mitochondrion	32.5	28.89
TraesCS2B01G263800.1	Wheat	mitochondrion	32.5	28.89
CDY14169	Canola	cytosol	29.17	28.57
CDY59509	Canola	cytosol, plastid	30.0	28.57
Zm00001d018827_P001	Maize	mitochondrion	30.83	27.51
CDY32696	Canola	cytosol, plastid	28.75	27.49
Os03t0648800-00	Rice	mitochondrion	37.08	27.47
CDY67732	Canola	plastid	29.58	27.41
CDY32794	Canola	peroxisome	29.58	27.41
CDY70634	Canola	plastid	29.58	26.59
TraesCS5B01G374300.1	Wheat	mitochondrion	34.58	26.35
CDX78539	Canola	cytosol, plastid	28.75	26.34
TraesCS5D01G381700.1	Wheat	mitochondrion	35.0	26.09
CDY18861	Canola	mitochondrion	26.67	26.02
CDX74802	Canola	cytosol, mitochondrion	26.67	25.91
CDX70521	Canola	plastid	28.75	25.75
TraesCS5A01G372200.1	Wheat	mitochondrion	35.0	25.53
Zm00001d013668_P001	Maize	mitochondrion	36.25	24.86
EER91159	Sorghum	mitochondrion	36.25	24.44
CDY04838	Canola	mitochondrion	36.25	24.3
Zm00001d033205_P001	Maize	mitochondrion	34.58	23.99
HORVU5Hr1G092580.1	Barley	cytosol	23.75	23.55
CDY04902	Canola	nucleus	33.75	23.34
CDY47842	Canola	cytosol	34.17	22.78
CDY62024	Canola	cytosol	33.75	22.5
CDY04039	Canola	cytosol	29.17	20.77
CDY70277	Canola	cytosol	29.17	20.77
CDY14762	Canola	cytosol, plastid	30.42	20.17
CDX76039	Canola	plastid	29.17	19.94
CDY06932	Canola	plastid	30.42	19.84
CDY20015	Canola	cytosol	31.67	18.81
CDX72074	Canola	plastid	30.83	18.59
CDY06138	Canola	plastid	30.42	18.48
CDY30970	Canola	plastid	28.33	18.48
CDY22520	Canola	plastid	30.42	18.2
CDY35418	Canola	plastid	30.42	18.2
CDX86410	Canola	cytosol	30.0	17.52
CDX85224	Canola	cytosol	30.0	17.39
CDY67051	Canola	cytosol	26.25	16.62
CDY30281	Canola	cytosol	26.67	16.58
CDX80894	Canola	nucleus	4.58	5.61
CDY11275	Canola	nucleus	4.58	5.56

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078ECL2	EnsemblPlants:CDX98926	ProteinID:CDX98926	ProteinID:CDX98926.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00107036001
InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF74
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE26C7	SEG:seg	:	:

Description

BnaC09g49090D

Coordinates

chrLK031907:-:645193..645915

Molecular Weight (calculated)

27541.1 Da

IEP (calculated)

7.085

GRAVY (calculated)

-0.527

Length

240 amino acids

Sequence
(BLAST)

001: MKGMKERLAK KIKLITIVST LKQGLAHHKS KIDRTIHHIR DEIVAESGQR KGCVTPTLPE LEYVDVSEQE HDVEEEEREI LSEFEENCPP GGEDSVVFYA
101: TGLRGVRKTF EACRRVRFLL ENHMVGYKER DVSVDSEYRD EMWRLLGRKV TSPRLFIRGR YIGGADEVVA LNENGKLKKL LQGISRVHSP CECCLNERFL
201: ICSSCYGSSR LIADDEETSN MWTRCRECNE KGLVRCPLCT

Best Arabidopsis Sequence Match ( AT5G06470.1 )
(BLAST)

001: MKGMKERLVK KIKLITTVKT LKQSLTLHKS TIDRTIHHLR DEIVAESGQS KGCVTPTLLE LEDAEEHNLE EERGILLEFK ENCPPGGEDS VVFYTTGLRS
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNG2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.