Factsheet for TraesCS2D01G250600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G263800.1	Wheat	mitochondrion	95.93	95.93
TraesCS2A01G249000.1	Wheat	mitochondrion	95.56	95.56
HORVU2Hr1G059940.1	Barley	mitochondrion	90.37	90.37
Os07t0159900-01	Rice	mitochondrion	68.89	72.66
Zm00001d007885_P001	Maize	mitochondrion	52.22	62.95
EER95886	Sorghum	mitochondrion	60.0	59.12
Zm00001d018827_P001	Maize	mitochondrion	57.41	57.62
Zm00001d012904_P001	Maize	cytosol	25.19	54.84
VIT_08s0032g01030.t01	Wine grape	cytosol	29.63	43.72
TraesCS2D01G131300.1	Wheat	cytosol	27.41	35.58
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	30.74	34.02
AT5G06470.1	Thale cress	cytosol, mitochondrion	30.0	33.89
Bra005898.1-P	Field mustard	cytosol, mitochondrion	30.0	32.79
Bra009197.1-P	Field mustard	cytosol	29.26	32.64
CDX98926	Canola	cytosol	28.89	32.5
TraesCS1D01G095500.1	Wheat	cytosol	36.67	32.25
CDY67834	Canola	cytosol	28.89	32.23
KRH72143	Soybean	mitochondrion	31.48	32.2
KRG96283	Soybean	mitochondrion	30.0	31.89
KRH32876	Soybean	cytosol	32.59	31.88
KRH68025	Soybean	cytosol	30.74	31.44
TraesCS5D01G381700.1	Wheat	mitochondrion	36.67	30.75
TraesCS1D01G224200.1	Wheat	mitochondrion	25.93	30.3
CDY55763	Canola	cytosol, mitochondrion	23.7	28.83
CDX81007	Canola	cytosol, mitochondrion	23.7	28.83
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	31.11	28.09
AT3G11773.2	Thale cress	cytosol	20.74	28.0
TraesCS3D01G343100.1	Wheat	plastid	25.19	27.09
VIT_13s0073g00520.t01	Wine grape	cytosol	37.04	26.6
Solyc11g006430.1.1	Tomato	cytosol	34.81	26.04
PGSC0003DMT400005022	Potato	cytosol	34.07	25.07
KRH34627	Soybean	cytosol	34.07	24.93
KRG92161	Soybean	cytosol	34.44	24.47
TraesCS4D01G286300.1	Wheat	mitochondrion	29.26	24.23
CDY04838	Canola	mitochondrion	31.85	24.02
Bra028902.1-P	Field mustard	mitochondrion	31.85	24.02
TraesCS1D01G294800.1	Wheat	plastid	22.22	23.9
TraesCS6D01G285000.1	Wheat	mitochondrion	32.96	23.55
TraesCS2D01G292800.1	Wheat	mitochondrion	36.3	23.11
AT5G01420.1	Thale cress	cytosol	33.33	22.44
TraesCS3D01G166500.1	Wheat	cytosol	29.63	19.85
TraesCS3D01G334100.1	Wheat	plastid	30.0	19.76
TraesCS2D01G523500.1	Wheat	plastid	31.48	18.56
TraesCS7D01G186600.1	Wheat	plastid	30.74	16.5

Protein Annotations

EnsemblPlants:TraesCS2D01G250600.1	EnsemblPlantsGene:TraesCS2D01G250600	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:Glutaredoxin
InterPro:IPR002109	InterPro:Thioredoxin-like_sf	PANTHER:PTHR10168	PANTHER:PTHR10168:SF76	PFAM:PF00462	PFscan:PS51354
SEG:seg	SUPFAM:SSF52833	TIGR:cd03031	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:-:299370216..299371028

Molecular Weight (calculated)

28824.2 Da

IEP (calculated)

4.902

GRAVY (calculated)

-0.229

Length

270 amino acids

Sequence
(BLAST)

001: MTIQTLKARI LRVLRSSLPA APATASASLP PSPTKPGLVV LHSTDGLSDD ASFFDAHETP TKINLPAEPI DDDWELVDQD GNDRDSLASG PAPASDPDGM
101: LRDFPARCPP GGDEAVVLYT TTLRGIRKTF EDCNDVRALL DNLAVAFQER DVSMDRGLLE QLWAATGKKA VPPRLFVRGH DLGGAAQVLA LHEDGRLTSL
201: LQLPSLSAPE AAVSSNKKKE KCEACGGLRF VVCGECDGSR KVFDGERGGV RCHGCNENGL VMCTLCLYPS

Best Arabidopsis Sequence Match ( AT5G01420.1 )
(BLAST)

001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.