Factsheet for GSMUA_Achr6P03120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0032g01030.t01	Wine grape	cytosol	28.09	45.9
Zm00001d012904_P001	Maize	cytosol	18.39	44.35
AT5G06470.1	Thale cress	cytosol, mitochondrion	32.11	40.17
Bra009197.1-P	Field mustard	cytosol	32.11	39.67
CDY67834	Canola	cytosol	31.77	39.26
CDX98926	Canola	cytosol	31.44	39.17
VIT_13s0073g00520.t01	Wine grape	cytosol	48.49	38.56
CDX81007	Canola	cytosol, mitochondrion	28.43	38.29
KRH72143	Soybean	mitochondrion	33.78	38.26
KRG96283	Soybean	mitochondrion	32.44	38.19
Bra005898.1-P	Field mustard	cytosol, mitochondrion	31.44	38.06
Zm00001d007885_P001	Maize	mitochondrion	28.09	37.5
CDY55763	Canola	cytosol, mitochondrion	27.42	36.94
Os07t0159900-01	Rice	mitochondrion	31.44	36.72
KRH32876	Soybean	cytosol	33.78	36.59
KRG92161	Soybean	cytosol	45.82	36.05
KRH68025	Soybean	cytosol	31.77	35.98
TraesCS5B01G374300.1	Wheat	mitochondrion	37.79	35.87
KRH34627	Soybean	cytosol	44.15	35.77
Solyc11g006430.1.1	Tomato	cytosol	43.14	35.73
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	29.1	35.66
Os03t0648800-00	Rice	mitochondrion	38.13	35.19
PGSC0003DMT400005022	Potato	cytosol	43.14	35.15
TraesCS5D01G381700.1	Wheat	mitochondrion	37.46	34.78
TraesCS5A01G372200.1	Wheat	mitochondrion	36.79	33.43
GSMUA_Achr8P22080_001	Banana	cytosol	21.4	32.49
GSMUA_Achr5P29410_001	Banana	mitochondrion	25.08	32.47
Zm00001d033205_P001	Maize	mitochondrion	37.46	32.37
Zm00001d013668_P001	Maize	mitochondrion	37.12	31.71
EER91159	Sorghum	mitochondrion	37.46	31.46
TraesCS2A01G249000.1	Wheat	mitochondrion	28.09	31.11
TraesCS2B01G263800.1	Wheat	mitochondrion	28.09	31.11
TraesCS2D01G250600.1	Wheat	mitochondrion	28.09	31.11
EER95886	Sorghum	mitochondrion	28.43	31.02
AT3G11773.2	Thale cress	cytosol	20.74	31.0
Zm00001d018827_P001	Maize	mitochondrion	27.76	30.86
HORVU2Hr1G059940.1	Barley	mitochondrion	27.76	30.74
GSMUA_Achr8P09670_001	Banana	cytosol	21.07	30.73
GSMUA_Achr5P14280_001	Banana	plastid	23.08	30.13
GSMUA_Achr6P32840_001	Banana	cytosol	23.41	30.04
GSMUA_Achr4P18760_001	Banana	plastid	23.41	29.66
GSMUA_Achr2P20360_001	Banana	cytosol	26.76	29.09
HORVU5Hr1G092580.1	Barley	cytosol	23.08	28.51
GSMUA_Achr6P23380_001	Banana	mitochondrion	22.41	28.51
GSMUA_Achr7P18270_001	Banana	mitochondrion	24.75	28.46
CDY04838	Canola	mitochondrion	33.44	27.93
Bra028902.1-P	Field mustard	mitochondrion	33.44	27.93
GSMUA_Achr6P13210_001	Banana	cytosol	25.75	27.9
AT5G01420.1	Thale cress	cytosol	36.79	27.43
GSMUA_Achr6P18300_001	Banana	cytosol	30.77	23.59
GSMUA_Achr3P01620_001	Banana	mitochondrion	27.76	23.51
GSMUA_Achr9P02540_001	Banana	cytosol	30.43	23.21
GSMUA_Achr8P24180_001	Banana	cytosol	26.42	22.64
GSMUA_Achr4P00540_001	Banana	mitochondrion	28.43	21.63
GSMUA_Achr10P...	Banana	cytosol	23.08	18.55
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	23.75	17.57

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G03120_001
EnsemblPlants:GSMUA_Achr6P03120_001	EnsemblPlants:GSMUA_Achr6T03120_001	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0T3R0	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF195	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000295B7E6
SEG:seg	:	:	:	:	:

Description

glutaredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G03120_001]

Coordinates

chr6:+:2142036..2143211

Molecular Weight (calculated)

33952.4 Da

IEP (calculated)

4.727

GRAVY (calculated)

-0.853

Length

299 amino acids

Sequence
(BLAST)

001: MKGIRGRILK KLRSIPQVPY LKHQERVLHL VRDLEEEEEE EAACDEEESD HSSSRSSIGD KENSRPPPSS PPKEDSSWRT NDEEDQHGQE NETSYRRPDL
101: DSVTLFDPEL LAAFEKAVVE HMRSFEEAKS RARARIKEEE YDEHDGGGGG EPHGVEEPPS KTFEDCNGVR FLLDSLKVRF TERDVSMHLE FREELWRVLG
201: YRAIPPSLFI RGRYVGGADE VLGLHEQGRL LALLRGAARD RSAGEEACRG CGGVRFVVCW ECNGSRKIYH GEEEEEEDAC PAQCRHCNEN GLVVCPICC

Best Arabidopsis Sequence Match ( AT5G06470.1 )
(BLAST)

001: MKGMKERLVK KIKLITTVKT LKQSLTLHKS TIDRTIHHLR DEIVAESGQS KGCVTPTLLE LEDAEEHNLE EERGILLEFK ENCPPGGEDS VVFYTTGLRS
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNG2]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.