Factsheet for GSMUA_Achr6P13210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P20360_001	Banana	cytosol	65.22	65.45
Bra005786.1-P	Field mustard	cytosol	21.74	55.05
CDX80893	Canola	cytosol	21.74	55.05
CDY11274	Canola	cytosol	21.38	54.13
CDY14169	Canola	cytosol	46.01	51.84
GSMUA_Achr6P18300_001	Banana	cytosol	60.87	43.08
GSMUA_Achr9P02540_001	Banana	cytosol	60.87	42.86
VIT_08s0007g03220.t01	Wine grape	cytosol	56.16	38.94
CDY04902	Canola	nucleus	48.19	38.33
Bra028812.1-P	Field mustard	nucleus	48.19	38.11
Solyc09g009860.1.1	Tomato	cytosol	55.07	38.1
PGSC0003DMT400023120	Potato	cytosol	54.35	37.5
AT5G03870.1	Thale cress	cytosol	48.91	35.16
GSMUA_Achr8P22080_001	Banana	cytosol	24.28	34.01
GSMUA_Achr8P09670_001	Banana	cytosol	24.64	33.17
GSMUA_Achr5P29410_001	Banana	mitochondrion	26.45	31.6
KRH67928	Soybean	cytosol	52.17	31.44
GSMUA_Achr4P18760_001	Banana	plastid	24.64	28.81
GSMUA_Achr5P14280_001	Banana	plastid	23.19	27.95
GSMUA_Achr3P01620_001	Banana	mitochondrion	35.51	27.76
GSMUA_Achr8P24180_001	Banana	cytosol	34.06	26.93
GSMUA_Achr6P32840_001	Banana	cytosol	22.1	26.18
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	27.9	25.75
GSMUA_Achr6P23380_001	Banana	mitochondrion	21.74	25.53
GSMUA_Achr7P18270_001	Banana	mitochondrion	23.55	25.0
GSMUA_Achr4P00540_001	Banana	mitochondrion	34.78	24.43
GSMUA_Achr10P...	Banana	cytosol	31.52	23.39
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	32.97	22.52
CDX80894	Canola	nucleus	13.77	19.39
CDY11275	Canola	nucleus	13.41	18.69

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G13210_001	EnsemblPlants:GSMUA_Achr6P13210_001
EnsemblPlants:GSMUA_Achr6T13210_001	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0T6L9	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF79	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000294BC4A	SEG:seg

Description

glutaredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G13210_001]

Coordinates

chr6:-:8835210..8836424

Molecular Weight (calculated)

30430.7 Da

IEP (calculated)

4.947

GRAVY (calculated)

-0.272

Length

276 amino acids

Sequence
(BLAST)

001: MGCISSKPLA EDDLDPGIFI SDGVGLASEC PNHVVLLTST TYGVLNLDRS EPHGKKCDAE EAEEVIKREC RRSPRADLTI DRFDKSVAKE VPSEVIDARE
101: LMEDLVDETP FWTPLKKPAK LHASKCPPGG QNTVVLYTTT LRGIRKTFED CNAVRSTLES YHVRIMERDI SMDSGYREEL RSLMGSKEVK VPAAFVRGRL
201: IGGAEEVLRL EDEGKLELLL EGIPRAASSC EGCAGLRFIM CMDCSGSCKV LDEEQKKMVK CGVCNENGLI HCPICC

Best Arabidopsis Sequence Match ( AT5G03870.1 )
(BLAST)

001: MGCVSSKLGK KKLIREIRVN NGGDHIVSLT STTYGHLDLD ERAETSPKSL EVTKGEVFES EIIPRRSIKR DDPEIINTWE LMEDLEDSMH VSNPQKISPK
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9LZC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.