CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028902.1-P	Field mustard	mitochondrion	98.32	98.32
AT5G01420.1	Thale cress	cytosol	72.63	64.84
CDX80893	Canola	cytosol	12.57	41.28
Zm00001d012904_P001	Maize	cytosol	13.69	39.52
CDY11274	Canola	cytosol	11.73	38.53
Os07t0159900-01	Rice	mitochondrion	26.26	36.72
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	24.86	36.48
CDY67834	Canola	cytosol	24.58	36.36
CDX98926	Canola	cytosol	24.3	36.25
VIT_13s0073g00520.t01	Wine grape	cytosol	37.43	35.64
Zm00001d007885_P001	Maize	mitochondrion	22.07	35.27
KRH34627	Soybean	cytosol	36.31	35.23
Solyc11g006430.1.1	Tomato	cytosol	35.47	35.18
CDY01245	Canola	cytosol	25.42	35.14
CDX93821	Canola	cytosol	25.14	34.62
PGSC0003DMT400005022	Potato	cytosol	35.47	34.6
KRG92161	Soybean	cytosol	36.59	34.47
CDY55763	Canola	cytosol, mitochondrion	20.95	33.78
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	27.93	33.44
CDX90765	Canola	cytosol	24.86	33.33
CDX81007	Canola	cytosol, mitochondrion	20.67	33.33
TraesCS2A01G249000.1	Wheat	mitochondrion	24.86	32.96
CDY14169	Canola	cytosol	22.35	32.65
TraesCS2B01G263800.1	Wheat	mitochondrion	24.58	32.59
CDY05109	Canola	cytosol	24.02	32.45
Os03t0648800-00	Rice	mitochondrion	29.33	32.41
EER95886	Sorghum	mitochondrion	24.58	32.12
TraesCS5B01G374300.1	Wheat	mitochondrion	28.21	32.06
TraesCS5D01G381700.1	Wheat	mitochondrion	28.77	31.99
TraesCS2D01G250600.1	Wheat	mitochondrion	24.02	31.85
HORVU2Hr1G059940.1	Barley	mitochondrion	24.02	31.85
CDX74801	Canola	cytosol	14.8	31.74
HORVU5Hr1G092580.1	Barley	cytosol	20.95	30.99
Zm00001d033205_P001	Maize	mitochondrion	29.61	30.64
Zm00001d018827_P001	Maize	mitochondrion	22.91	30.48
TraesCS5A01G372200.1	Wheat	mitochondrion	27.93	30.4
EER91159	Sorghum	mitochondrion	29.89	30.06
Zm00001d013668_P001	Maize	mitochondrion	28.49	29.14
CDY04902	Canola	nucleus	27.65	28.53
CDY67732	Canola	plastid	20.11	27.8
CDY70634	Canola	plastid	20.39	27.34
CDX78539	Canola	cytosol, plastid	19.55	26.72
CDY32696	Canola	cytosol, plastid	18.72	26.69
CDY59509	Canola	cytosol, plastid	18.72	26.59
CDY00113	Canola	cytosol	9.78	26.32
CDX70521	Canola	plastid	19.55	26.12
CDY32794	Canola	peroxisome	18.72	25.87
CDY18861	Canola	mitochondrion	17.04	24.8
CDX74802	Canola	cytosol, mitochondrion	16.76	24.29
CDY14762	Canola	cytosol, plastid	21.79	21.55
CDY06932	Canola	plastid	22.07	21.47
CDY47842	Canola	cytosol	21.51	21.39
CDY62024	Canola	cytosol	21.51	21.39
CDX76039	Canola	plastid	20.11	20.51
CDY70277	Canola	cytosol	19.27	20.47
CDY67051	Canola	cytosol	21.51	20.32
CDY22520	Canola	plastid	22.63	20.2
CDY35418	Canola	plastid	22.63	20.2
CDY04039	Canola	cytosol	18.99	20.18
CDY30281	Canola	cytosol	21.51	19.95
CDY30970	Canola	plastid	20.39	19.84
CDY20015	Canola	cytosol	21.79	19.31
CDX86410	Canola	cytosol	22.07	19.22
CDX85224	Canola	cytosol	22.07	19.08
CDY06138	Canola	plastid	20.95	18.99
CDX72074	Canola	plastid	20.67	18.59
CDY11275	Canola	nucleus	6.42	11.62
CDX80894	Canola	nucleus	6.15	11.22

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078EYV0	EnsemblPlants:CDY04838	ProteinID:CDY04838	ProteinID:CDY04838.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00119550001	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF195	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE43DC	SEG:seg	:	:	:

Description

BnaAnng00200D

Coordinates

chrLK031958:+:182753..183829

Molecular Weight (calculated)

40121.6 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.460

Length

358 amino acids

Sequence
(BLAST)

001: MKSSRMKFAK KLKSIRAAGE YLNQDRILQV ISAADELLPK ISNQITAGSM MWRAPPQHQI DDATTELAEN ENKGEEASGN EENIRPPVNQ IPRDIKSAVM
101: GRKSLGSGFR RPELNSITLF DPNLLEAFEL AVACFRRIND LSRNPNLDED EDVIAFPADE SGMEKVSIED TLPPLDDEQE EEEDRGQDLE IVAEEEPLMG
201: FEERCPPGGE ESVVFYTTSL RGIRKTFDDC NMIRFLLDSF KVKYYERDVS MHKHYRDELR SISAAAEETE VLPPVLFVKG RCIGGAQRVL GLHEQGKFRA
301: LFEGVPVAGD TPCGRCDGFR FLMCDGCRGS RRIVSTDGSR IQCLLCNENG LIVCLDCS

Best Arabidopsis Sequence Match ( AT5G01420.1 )
(BLAST)

001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.