Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G048520.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58530.1 | HORVU2Hr1G048520.1 | AT1G30860.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G294800.1 | Wheat | plastid | 83.91 | 87.25 |
| TraesCS1A01G296500.1 | Wheat | mitochondrion | 84.29 | 86.96 |
| TraesCS1B01G305600.1 | Wheat | mitochondrion, plastid | 83.14 | 86.45 |
| Os05t0471350-00 | Rice | mitochondrion, plastid | 56.32 | 57.2 |
| HORVU3Hr1G087930.1 | Barley | plastid | 50.57 | 53.23 |
| GSMUA_Achr5P29410_001 | Banana | mitochondrion | 43.3 | 48.92 |
| GSMUA_Achr5P14280_001 | Banana | plastid | 42.53 | 48.47 |
| GSMUA_Achr4P18760_001 | Banana | plastid | 43.68 | 48.31 |
| Bra002640.1-P | Field mustard | cytosol | 21.07 | 46.61 |
| GSMUA_Achr6P32840_001 | Banana | cytosol | 38.7 | 43.35 |
| GSMUA_Achr7P18270_001 | Banana | mitochondrion | 41.38 | 41.54 |
| GSMUA_Achr6P23380_001 | Banana | mitochondrion | 37.16 | 41.28 |
| KRH30192 | Soybean | plastid | 36.02 | 40.69 |
| HORVU1Hr1G060210.1 | Barley | mitochondrion, plastid | 37.16 | 40.25 |
| KRG98239 | Soybean | plastid | 35.63 | 39.41 |
| KRH14919 | Soybean | plastid | 36.02 | 38.84 |
| VIT_06s0004g07040.t01 | Wine grape | cytosol, mitochondrion | 36.4 | 38.62 |
| KRG97693 | Soybean | plastid | 33.72 | 38.43 |
| CDX74801 | Canola | cytosol | 24.52 | 38.32 |
| KRH31178 | Soybean | plastid | 33.33 | 37.99 |
| PGSC0003DMT400078241 | Potato | cytosol, plastid | 33.72 | 36.67 |
| CDY32794 | Canola | peroxisome | 36.02 | 36.29 |
| CDY59509 | Canola | cytosol, plastid | 34.87 | 36.11 |
| Solyc06g082180.1.1 | Tomato | cytosol, plastid | 34.87 | 35.83 |
| PGSC0003DMT400078242 | Potato | cytosol, plastid | 34.48 | 35.43 |
| HORVU7Hr1G043870.1 | Barley | cytosol | 10.34 | 35.06 |
| CDY32696 | Canola | cytosol, plastid | 33.72 | 35.06 |
| Bra020363.1-P | Field mustard | cytosol, plastid | 33.72 | 34.92 |
| VIT_13s0067g01650.t01 | Wine grape | plastid | 39.08 | 34.69 |
| HORVU7Hr1G076170.1 | Barley | plastid | 29.12 | 34.23 |
| AT5G58530.1 | Thale cress | cytosol, plastid | 34.87 | 33.33 |
| KRH73271 | Soybean | plastid | 38.31 | 33.22 |
| KRH72724 | Soybean | plastid | 35.63 | 33.1 |
| KRH17081 | Soybean | plastid | 36.02 | 31.13 |
| CDY18861 | Canola | mitochondrion | 28.74 | 30.49 |
| CDX74802 | Canola | cytosol, mitochondrion | 28.74 | 30.36 |
| Bra004972.1-P | Field mustard | mitochondrion | 28.74 | 30.36 |
| Bra004971.1-P | Field mustard | plastid | 27.2 | 28.06 |
| HORVU4Hr1G075190.2 | Barley | mitochondrion | 28.74 | 22.94 |
| HORVU1Hr1G021100.2 | Barley | cytosol | 26.82 | 22.51 |
| HORVU2Hr1G059940.1 | Barley | mitochondrion | 22.99 | 22.22 |
| HORVU0Hr1G017160.1 | Barley | mitochondrion | 31.42 | 21.58 |
| Solyc06g082170.2.1 | Tomato | cytosol, plastid | 32.18 | 20.24 |
| HORVU7Hr1G038000.2 | Barley | cytosol, plastid | 32.57 | 20.09 |
| HORVU5Hr1G092580.1 | Barley | cytosol | 18.01 | 19.42 |
| HORVU2Hr1G115200.2 | Barley | cytosol | 31.8 | 18.0 |
| HORVU2Hr1G073040.1 | Barley | cytosol | 26.82 | 16.67 |
| HORVU3Hr1G057240.1 | Barley | cytosol | 26.05 | 16.67 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | UniProt:A0A287G4J5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin |
| EnsemblPlantsGene:HORVU1Hr1G070570 | EnsemblPlants:HORVU1Hr1G070570.1 | InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 |
| PANTHER:PTHR10168:SF95 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000B46CB73 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:+:490352425..490353490
Molecular Weight (calculated)
28254.8 Da
IEP (calculated)
8.506
GRAVY (calculated)
-0.252
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: TDKTPPLPSP PSSQPPMAMW PSWVKTRASS SKSSPSTALV AAAATTRRFS ITSHSPSLKD IQSLVHPEPA RPPPPRVFHR LRVAASALRL LRALKSASAH
101: DTAREPEVHV VLYFTSLRVV RRTYEDCYTV RFILRGIGAT VDERDLAMDN GFVAEFAALL PPRLGLALPQ VFVDGRHLGG VEEVQRLHES GELNRIVAAP
201: ASPALPRPPC GRCGDERHVP CGSCDGSRKK HSDEDGAFIT CDACNENGLV RCPDCLFPAA A
101: DTAREPEVHV VLYFTSLRVV RRTYEDCYTV RFILRGIGAT VDERDLAMDN GFVAEFAALL PPRLGLALPQ VFVDGRHLGG VEEVQRLHES GELNRIVAAP
201: ASPALPRPPC GRCGDERHVP CGSCDGSRKK HSDEDGAFIT CDACNENGLV RCPDCLFPAA A
001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP
Arabidopsis Description
At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.