Factsheet for Zm00001d012471_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006417_P002
Zm00001d021532_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	Zm00001d006417_P002	AT1G30860.1	21798944
AT5G58530.1	Zm00001d021532_P001	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0343900-01	Rice	cytosol	65.22	56.82
Bra002640.1-P	Field mustard	cytosol	42.61	41.53
HORVU3Hr1G087930.1	Barley	plastid	84.35	39.11
Zm00001d026424_P001	Maize	cytosol	41.74	38.4
TraesCS3A01G349200.1	Wheat	plastid	82.61	38.31
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	82.61	38.15
TraesCS3D01G343100.1	Wheat	plastid	82.61	37.85
Os01t0829400-01	Rice	mitochondrion	82.61	37.25
OQU81447	Sorghum	plastid	57.39	34.92
Zm00001d043006_P001	Maize	plastid	86.96	34.6
Zm00001d010594_P001	Maize	plastid	69.57	32.13
Zm00001d038445_P001	Maize	cytosol	73.04	30.32
GSMUA_Achr5P29410_001	Banana	mitochondrion	58.26	29.0
GSMUA_Achr5P14280_001	Banana	plastid	57.39	28.82
Zm00001d029202_P001	Maize	cytosol	47.83	27.78
Zm00001d038018_P001	Maize	mitochondrion	57.39	27.62
GSMUA_Achr6P32840_001	Banana	cytosol	55.65	27.47
Zm00001d010509_P001	Maize	mitochondrion	58.26	27.13
CDX74801	Canola	cytosol	39.13	26.95
HORVU7Hr1G076170.1	Barley	plastid	51.3	26.58
GSMUA_Achr6P23380_001	Banana	mitochondrion	53.91	26.38
GSMUA_Achr7P18270_001	Banana	mitochondrion	57.39	25.38
GSMUA_Achr4P18760_001	Banana	plastid	51.3	25.0
Zm00001d022403_P001	Maize	cytosol, plastid	41.74	23.65
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	49.57	23.17
Zm00001d012904_P001	Maize	cytosol	24.35	22.58
KRG97693	Soybean	plastid	44.35	22.27
KRH31178	Soybean	plastid	44.35	22.27
PGSC0003DMT400078241	Potato	cytosol, plastid	46.09	22.08
PGSC0003DMT400078242	Potato	cytosol, plastid	47.83	21.65
Solyc06g082180.1.1	Tomato	cytosol, plastid	47.83	21.65
KRH14919	Soybean	plastid	45.22	21.49
Bra020363.1-P	Field mustard	cytosol, plastid	45.22	20.63
CDY59509	Canola	cytosol, plastid	44.35	20.24
CDY32696	Canola	cytosol, plastid	43.48	19.92
KRH30192	Soybean	plastid	40.0	19.91
Zm00001d007885_P001	Maize	mitochondrion	38.26	19.64
CDY32794	Canola	peroxisome	43.48	19.3
KRG98239	Soybean	plastid	39.13	19.07
VIT_13s0067g01650.t01	Wine grape	plastid	48.7	19.05
CDY18861	Canola	mitochondrion	40.0	18.7
AT5G58530.1	Thale cress	cytosol, plastid	44.35	18.68
Bra004972.1-P	Field mustard	mitochondrion	38.26	17.81
CDX74802	Canola	cytosol, mitochondrion	38.26	17.81
Bra004971.1-P	Field mustard	plastid	39.13	17.79
KRH73271	Soybean	plastid	46.09	17.61
KRH72724	Soybean	plastid	41.74	17.08
Zm00001d018827_P001	Maize	mitochondrion	39.13	16.73
KRH17081	Soybean	plastid	41.74	15.89
Zm00001d027853_P001	Maize	plastid	40.87	14.42
Zm00001d052252_P001	Maize	mitochondrion	46.09	14.4
Zm00001d018058_P001	Maize	plastid	46.96	14.32
Zm00001d033205_P001	Maize	mitochondrion	42.61	14.16
Zm00001d054094_P001	Maize	cytosol	38.26	14.1
Zm00001d013668_P001	Maize	mitochondrion	42.61	14.0
Zm00001d024469_P001	Maize	cytosol, plastid	44.35	13.9
Solyc06g082170.2.1	Tomato	cytosol, plastid	44.35	12.29
Zm00001d002123_P001	Maize	plastid	45.22	12.26
Zm00001d037218_P001	Maize	plastid	45.22	12.15
Zm00001d044841_P001	Maize	plastid	44.35	11.67
Zm00001d039270_P001	Maize	cytosol	38.26	11.08
Zm00001d003779_P001	Maize	cytosol	40.0	10.29

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	UniProt:A0A1D6G8Z3	ProteinID:AQK99608.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:Glutaredoxin	InterPro:IPR002109	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF75	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000843137F	EnsemblPlantsGene:Zm00001d012471	EnsemblPlants:Zm00001d012471_P001	EnsemblPlants:Zm00001d012471_T001	SEG:seg

Description

Glutaredoxin family protein

Coordinates

chr8:-:175078336..175078683

Molecular Weight (calculated)

11920.4 Da

IEP (calculated)

8.592

GRAVY (calculated)

-0.143

Length

115 amino acids

Sequence
(BLAST)

001: MDPRYLPELA ALLPRLASPR RATLPQVFVG GRHLGGADEV RRLHEAGELR RVVAGAGAAS LAACGRCGGE QYVLCGSCDG SHKRYSAKGG GGFRACAGCN
101: ENGLVRCPVC SPPDV

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.