Factsheet for Zm00001d027853_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95421	Sorghum	mitochondrion, plastid	89.88	87.2
TraesCS4D01G286300.1	Wheat	mitochondrion	75.46	75.46
HORVU4Hr1G075190.2	Barley	mitochondrion	75.15	74.92
TraesCS4A01G016500.1	Wheat	mitochondrion	75.46	74.55
TraesCS4B01G287700.1	Wheat	mitochondrion	74.54	74.09
Os03t0170800-00	Rice	mitochondrion	72.39	73.29
Zm00001d026424_P001	Maize	cytosol	19.02	49.6
GSMUA_Achr3P01620_001	Banana	mitochondrion	50.92	47.03
CDY00113	Canola	cytosol	18.71	45.86
Zm00001d029202_P001	Maize	cytosol	27.61	45.45
Zm00001d012471_P001	Maize	cytosol, plastid	14.42	40.87
Zm00001d022403_P001	Maize	cytosol, plastid	24.85	39.9
PGSC0003DMT400017853	Potato	cytosol	36.5	36.84
Zm00001d007885_P001	Maize	mitochondrion	25.15	36.61
Bra033062.1-P	Field mustard	cytosol	37.42	36.2
CDY70277	Canola	cytosol	37.42	36.2
Zm00001d018058_P001	Maize	plastid	41.41	35.81
CDY04039	Canola	cytosol	36.81	35.61
Zm00001d052252_P001	Maize	mitochondrion	40.18	35.6
Zm00001d002123_P001	Maize	plastid	45.4	34.91
Zm00001d010594_P001	Maize	plastid	26.38	34.54
CDY67051	Canola	cytosol	39.57	34.04
CDY30281	Canola	cytosol	40.18	33.94
Zm00001d054094_P001	Maize	cytosol	32.21	33.65
AT5G39865.1	Thale cress	cytosol, mitochondrion	40.18	33.59
Zm00001d044841_P001	Maize	plastid	44.17	32.95
Bra025638.1-P	Field mustard	cytosol	41.41	32.93
PGSC0003DMT400056766	Potato	cytosol	39.88	32.75
Zm00001d037218_P001	Maize	plastid	42.33	32.24
Zm00001d038018_P001	Maize	mitochondrion	23.62	32.22
Zm00001d024469_P001	Maize	cytosol, plastid	36.2	32.15
Solyc02g087850.1.1	Tomato	cytosol, plastid	40.8	31.74
PGSC0003DMT400003335	Potato	cytosol	40.49	31.5
Zm00001d012904_P001	Maize	cytosol	11.96	31.45
Solyc02g067400.1.1	Tomato	cytosol	27.3	31.34
Bra025357.1-P	Field mustard	cytosol	39.26	31.14
CDX86410	Canola	cytosol	39.26	31.14
AT3G28850.1	Thale cress	cytosol	40.49	30.84
Bra039044.1-P	Field mustard	cytosol	39.88	30.81
KRH40113	Soybean	cytosol, mitochondrion	43.25	30.79
CDY20015	Canola	cytosol	38.04	30.69
CDX85224	Canola	cytosol	38.96	30.68
KRH01158	Soybean	cytosol	43.25	30.39
Zm00001d010509_P001	Maize	mitochondrion	23.01	30.36
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	41.72	30.22
KRG93517	Soybean	cytosol	40.49	30.21
Zm00001d018827_P001	Maize	mitochondrion	24.85	30.11
Zm00001d038445_P001	Maize	cytosol	24.23	28.52
Zm00001d043006_P001	Maize	plastid	23.93	26.99
Zm00001d033205_P001	Maize	mitochondrion	26.38	24.86
Zm00001d013668_P001	Maize	mitochondrion	26.07	24.29
Zm00001d003779_P001	Maize	cytosol	30.98	22.6
Zm00001d039270_P001	Maize	cytosol	25.15	20.65

Protein Annotations

EntrezGene:100501215	Gene3D:3.40.30.10	MapMan:35.1	EMBL:BT084793	UniProt:C4J1U6	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	ProteinID:ONL94117.1	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF130	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A4C3C3	EnsemblPlantsGene:Zm00001d027853
EnsemblPlants:Zm00001d027853_P001	EnsemblPlants:Zm00001d027853_T001	SEG:seg	:	:	:

Description

Glutaredoxin family protein

Coordinates

chr1:+:15300088..15301068

Molecular Weight (calculated)

34427.9 Da

IEP (calculated)

5.013

GRAVY (calculated)

-0.275

Length

326 amino acids

Sequence
(BLAST)

001: MGCTTSRQAR HDLRYCPSPL PRSQSFPARC PSDVGVHVVR LTSSTLGSLE LDKALPRAPE PAPTRLAPRT PTMTPPNEPE DIDAWALMAG LEDRSPLLGA
101: PFGRHSFSFP VATAPAQDLA ASAKVTPLPM PMPRPDAAPT SGGEGKALPP RRAVLYFTSL RGVRATHEDC CLARAILKGY GVRLDERDVS MHRGFRDELR
201: GLLGLGLGQA GGTPAALPSL FVDGELVGNA EELKRLHEAG ELAPRLAGCE SAASTAGPHG GDAGACEACG DMRFVLCDVC SGSCKVYVGD EDEAEEEEEG
301: DECGGGFRRC TECNENGIVR CPVCCC

Best Arabidopsis Sequence Match ( AT5G39865.1 )
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Arabidopsis Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.