CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00113	Canola	cytosol	19.22	63.16
KRH01158	Soybean	cytosol	58.81	55.39
KRH40113	Soybean	cytosol, mitochondrion	57.21	54.59
PGSC0003DMT400017853	Potato	cytosol	39.82	53.87
CDY70277	Canola	cytosol	40.27	52.23
Bra033062.1-P	Field mustard	cytosol	40.05	51.93
CDY04039	Canola	cytosol	40.05	51.93
CDY67051	Canola	cytosol	44.39	51.19
CDY30281	Canola	cytosol	45.08	51.04
AT5G39865.1	Thale cress	cytosol, mitochondrion	44.39	49.74
Zm00001d026424_P001	Maize	cytosol	14.19	49.6
Bra025638.1-P	Field mustard	cytosol	46.0	49.02
AT3G28850.1	Thale cress	cytosol	47.83	48.83
PGSC0003DMT400003335	Potato	cytosol	46.68	48.69
PGSC0003DMT400056766	Potato	cytosol	44.16	48.61
Solyc02g087850.1.1	Tomato	cytosol, plastid	46.45	48.45
CDY20015	Canola	cytosol	44.39	48.02
Bra039044.1-P	Field mustard	cytosol	46.22	47.87
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	49.2	47.78
CDX86410	Canola	cytosol	44.85	47.69
Bra025357.1-P	Field mustard	cytosol	44.85	47.69
CDX85224	Canola	cytosol	44.85	47.34
Solyc02g067400.1.1	Tomato	cytosol	30.66	47.18
Os03t0170800-00	Rice	mitochondrion	29.98	40.68
Zm00001d027853_P001	Maize	plastid	30.21	40.49
EER95421	Sorghum	mitochondrion, plastid	30.89	40.18
TraesCS4D01G286300.1	Wheat	mitochondrion	29.75	39.88
KRH41800	Soybean	cytosol	24.49	39.63
HORVU4Hr1G075190.2	Barley	mitochondrion	29.52	39.45
GSMUA_Achr3P01620_001	Banana	mitochondrion	31.58	39.09
TraesCS4A01G016500.1	Wheat	mitochondrion	29.52	39.09
TraesCS4B01G287700.1	Wheat	mitochondrion	29.29	39.02
GSMUA_Achr8P24180_001	Banana	cytosol	30.66	38.4
GSMUA_Achr4P00540_001	Banana	mitochondrion	34.1	37.91
KRH30192	Soybean	plastid	19.22	36.36
Os02t0748800-00	Rice	cytosol, mitochondrion	29.98	35.5
KRG98239	Soybean	plastid	18.99	35.17
Zm00001d052252_P001	Maize	mitochondrion	29.06	34.51
EES05526	Sorghum	mitochondrion	29.98	34.47
TraesCS6D01G285000.1	Wheat	mitochondrion	29.75	34.39
TraesCS6B01G334000.1	Wheat	mitochondrion	29.98	34.29
TraesCS6A01G305800.1	Wheat	mitochondrion	30.21	34.29
HORVU0Hr1G017160.1	Barley	mitochondrion	29.75	34.21
KRG97693	Soybean	plastid	17.85	34.06
KRH14919	Soybean	plastid	18.54	33.47
Zm00001d018058_P001	Maize	plastid	28.83	33.42
KRH13399	Soybean	plastid	20.37	33.33
KRH31178	Soybean	plastid	17.39	33.19
KRH62918	Soybean	cytosol, plastid	19.45	33.07
KRH20755	Soybean	plastid	20.14	32.47
Zm00001d002123_P001	Maize	plastid	31.35	32.31
KRH72143	Soybean	mitochondrion	19.45	32.2
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	29.06	31.44
KRH32876	Soybean	cytosol	19.45	30.8
Os04t0641300-01	Rice	cytosol, plastid	30.89	30.47
KRH72724	Soybean	plastid	19.22	29.89
Os06t0226100-00	Rice	plastid	26.09	29.77
Zm00001d024469_P001	Maize	cytosol, plastid	24.71	29.43
TraesCS2A01G521700.1	Wheat	plastid	30.66	29.26
TraesCS2B01G551200.1	Wheat	cytosol, plastid	30.66	29.26
TraesCS2D01G523500.1	Wheat	plastid	30.66	29.26
KRG96283	Soybean	mitochondrion	16.93	29.13
HORVU2Hr1G115200.2	Barley	cytosol	30.43	28.85
KRG95123	Soybean	plastid	27.69	28.54
KRH60067	Soybean	cytosol	21.97	28.49
KRH68025	Soybean	cytosol	17.16	28.41
EES14625	Sorghum	cytosol, plastid	26.09	28.15
HORVU7Hr1G038000.2	Barley	cytosol, plastid	27.0	27.9
KRH17081	Soybean	plastid	19.22	27.81
Zm00001d037218_P001	Maize	plastid	27.23	27.8
Zm00001d044841_P001	Maize	plastid	27.46	27.46
KRH73271	Soybean	plastid	18.76	27.24
OQU82428	Sorghum	cytosol, plastid	30.89	27.16
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	28.15	27.03
KRH67928	Soybean	cytosol	27.46	26.2
TraesCS7B01G090200.1	Wheat	cytosol, plastid	27.92	26.12
EER88108	Sorghum	plastid	27.23	26.1
TraesCS3A01G340600.1	Wheat	plastid	24.26	25.85
TraesCS3D01G334100.1	Wheat	plastid	24.03	25.61
TraesCS3B01G372200.1	Wheat	plastid	24.03	25.55
TraesCS7D01G186600.1	Wheat	plastid	27.92	24.25
KRH66801	Soybean	plastid	20.59	24.0
KRG92161	Soybean	cytosol	20.14	23.16
KRH34627	Soybean	cytosol	19.22	22.76
Os08t0171333-00	Rice	plastid	15.79	21.84

Protein Annotations

EntrezGene:100775994	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02011579	EnsemblPlantsGene:GLYMA_19G021300	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	UniProt:I1N640	InterPro:IPR002109	EnsemblPlants:KRG93517	ProteinID:KRG93517
ProteinID:KRG93517.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000233DECF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:2296763..2299410

Molecular Weight (calculated)

49023.9 Da

IEP (calculated)

4.461

GRAVY (calculated)

-0.768

Length

437 amino acids

Sequence
(BLAST)

001: MGCANSKPKG CQHCHCNTPY YSSSMARSFS VHVHHPPQTK GDSYHVVALT STTLGSLDQD VPHNNNYHGN GLRFPNGKVI GSDSFRPQNQ DHDDDDDDDE
101: VEVEEKKNEP KTWSEMIEQM LPKAMMKSPI STPPCEPETI NTWELMEGLE DTTSPFRSPK HFKSFSFDVN VNRHVDVADV DPPLIQNGND SAKPISVSDS
201: DDEPQENQES MDRKRFFSIE EEMISDDVVS SFKKSSQEKQ EGMDRKGFSV GEEKISDDDD VVVDLKSCGK DKVVLYFTSL RGVRKTYEDC CHVRLILKGL
301: GVRVDERDVS MHSGFKEELK ELLGHGYGKG GLGLPRVFVG RNYIGGAEEI QQLHEEGKLE KLLDCCGKIE DGIDGDGLCE ACGDVRFMPC ETCYGSCKIY
401: YEGDEEEDYD GEVGEYGFQR CPDCNENGLI RCPMCCY

Best Arabidopsis Sequence Match ( AT5G39865.1 )
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Arabidopsis Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.