Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G334100.1 | Wheat | plastid | 93.41 | 93.41 |
| TraesCS3B01G372200.1 | Wheat | plastid | 93.17 | 92.94 |
| CDY00113 | Canola | cytosol | 13.9 | 42.86 |
| Zm00001d024469_P001 | Maize | cytosol, plastid | 38.05 | 42.51 |
| EES14625 | Sorghum | cytosol, plastid | 41.46 | 41.98 |
| TraesCS2A01G128800.1 | Wheat | cytosol | 20.24 | 40.89 |
| Os08t0171333-00 | Rice | plastid | 31.22 | 40.51 |
| TraesCS4A01G148500.1 | Wheat | cytosol | 19.02 | 38.24 |
| TraesCS2A01G521700.1 | Wheat | plastid | 40.49 | 36.24 |
| TraesCS6A01G305800.1 | Wheat | mitochondrion | 33.9 | 36.1 |
| TraesCS1A01G222600.1 | Wheat | mitochondrion | 19.02 | 33.77 |
| TraesCS4A01G016500.1 | Wheat | mitochondrion | 26.59 | 33.03 |
| TraesCS7A01G185200.1 | Wheat | mitochondrion, plastid | 34.15 | 30.77 |
| TraesCS3A01G349200.1 | Wheat | plastid | 18.54 | 30.65 |
| CDY04039 | Canola | cytosol | 24.88 | 30.27 |
| PGSC0003DMT400017853 | Potato | cytosol | 23.17 | 29.41 |
| Bra033062.1-P | Field mustard | cytosol | 24.15 | 29.38 |
| CDY70277 | Canola | cytosol | 24.15 | 29.38 |
| CDY67051 | Canola | cytosol | 27.07 | 29.29 |
| TraesCS2A01G249000.1 | Wheat | mitochondrion | 19.27 | 29.26 |
| CDY30281 | Canola | cytosol | 27.32 | 29.02 |
| TraesCS1A01G103100.1 | Wheat | cytosol | 21.46 | 28.95 |
| CDX86410 | Canola | cytosol | 28.78 | 28.71 |
| Bra025357.1-P | Field mustard | cytosol | 28.78 | 28.71 |
| Solyc02g067400.1.1 | Tomato | cytosol | 19.76 | 28.52 |
| CDX85224 | Canola | cytosol | 28.78 | 28.5 |
| AT3G28850.1 | Thale cress | cytosol | 29.27 | 28.04 |
| Bra025638.1-P | Field mustard | cytosol | 27.8 | 27.8 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 26.34 | 27.69 |
| TraesCS1A01G296500.1 | Wheat | mitochondrion | 17.07 | 27.67 |
| CDY20015 | Canola | cytosol | 27.07 | 27.48 |
| Bra039044.1-P | Field mustard | cytosol | 28.05 | 27.25 |
| PGSC0003DMT400056766 | Potato | cytosol | 26.1 | 26.95 |
| TraesCS5A01G372200.1 | Wheat | mitochondrion | 20.98 | 26.14 |
| KRH40113 | Soybean | cytosol, mitochondrion | 29.02 | 25.98 |
| KRH01158 | Soybean | cytosol | 29.27 | 25.86 |
| Solyc02g087850.1.1 | Tomato | cytosol, plastid | 26.34 | 25.78 |
| PGSC0003DMT400003335 | Potato | cytosol | 26.1 | 25.54 |
| VIT_14s0108g00400.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 27.56 | 25.11 |
| KRG93517 | Soybean | cytosol | 25.85 | 24.26 |
| TraesCS2A01G295000.1 | Wheat | mitochondrion | 20.98 | 20.28 |
| TraesCS3A01G158800.1 | Wheat | cytosol | 20.0 | 20.25 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF80 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | EnsemblPlantsGene:TraesCS3A01G340600 | EnsemblPlants:TraesCS3A01G340600.1 | TIGR:cd03031 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:+:587877478..587878710
Molecular Weight (calculated)
43193.9 Da
IEP (calculated)
5.186
GRAVY (calculated)
-0.164
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSSSTLAR GGVDMSALPA PARPERRHSL PSRAASALGS HGLCRGRHDG LHPYTRLPLE ETVKGEAEYG APSAEAKAAS FSGDAAAWPA EGRAPVKLSP
101: AGILEGAASA TSSTAHWTAS ATSSTPQFSA SPSWFRGESS SPPPPVQFVA PDFDPAILSL FREALVGQSP SHPAVLFPEN EATTLRETAA LDEAVPPAAR
201: DMPEVTGLVR ARVDEFHKKL EEMKEMKEAE AQSATRDATD EVAAPPPRKA VVVYFTSIRG VRKTFADGAA VRAILFSYRV RVDERDVSMH AAFKDELRNL
301: VSLAAGGGHV LPRVFVLGDG EQQQDLGGAD EVSALHESGE LAHALAGCET VAALLPPCVG CGDLRFLPCD RCFGSCKLFA GDEGGCVGDM FEECTHCNEN
401: GLIRCPVCCL
101: AGILEGAASA TSSTAHWTAS ATSSTPQFSA SPSWFRGESS SPPPPVQFVA PDFDPAILSL FREALVGQSP SHPAVLFPEN EATTLRETAA LDEAVPPAAR
201: DMPEVTGLVR ARVDEFHKKL EEMKEMKEAE AQSATRDATD EVAAPPPRKA VVVYFTSIRG VRKTFADGAA VRAILFSYRV RVDERDVSMH AAFKDELRNL
301: VSLAAGGGHV LPRVFVLGDG EQQQDLGGAD EVSALHESGE LAHALAGCET VAALLPPCVG CGDLRFLPCD RCFGSCKLFA GDEGGCVGDM FEECTHCNEN
401: GLIRCPVCCL
001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
Arabidopsis Description
Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.