Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G292800.1 | Wheat | mitochondrion | 97.64 | 97.64 |
TraesCS2B01G311500.1 | Wheat | mitochondrion | 96.7 | 97.16 |
HORVU2Hr1G073040.1 | Barley | cytosol | 94.81 | 95.71 |
Os04t0412800-01 | Rice | cytosol, plastid | 85.38 | 80.8 |
EES10743 | Sorghum | cytosol | 82.78 | 77.83 |
Zm00001d003779_P001 | Maize | cytosol | 81.6 | 77.4 |
Bra005786.1-P | Field mustard | cytosol | 13.68 | 53.21 |
CDY11274 | Canola | cytosol | 13.68 | 53.21 |
CDX80893 | Canola | cytosol | 12.97 | 50.46 |
GSMUA_Achr2P20360_001 | Banana | cytosol | 32.31 | 49.82 |
CDY14169 | Canola | cytosol | 27.83 | 48.16 |
TraesCS1A01G103100.1 | Wheat | cytosol | 33.02 | 46.05 |
CDY04902 | Canola | nucleus | 35.14 | 42.94 |
Bra028812.1-P | Field mustard | nucleus | 35.14 | 42.69 |
VIT_08s0007g03220.t01 | Wine grape | cytosol | 39.39 | 41.96 |
Solyc09g009860.1.1 | Tomato | cytosol | 37.97 | 40.35 |
PGSC0003DMT400023120 | Potato | cytosol | 37.97 | 40.25 |
AT5G03870.1 | Thale cress | cytosol | 35.85 | 39.58 |
TraesCS4A01G148500.1 | Wheat | cytosol | 18.63 | 38.73 |
TraesCS2A01G128800.1 | Wheat | cytosol | 17.92 | 37.44 |
TraesCS2A01G249000.1 | Wheat | mitochondrion | 23.35 | 36.67 |
KRH67928 | Soybean | cytosol | 37.26 | 34.5 |
CDX80894 | Canola | nucleus | 15.8 | 34.18 |
CDY11275 | Canola | nucleus | 15.33 | 32.83 |
TraesCS5A01G372200.1 | Wheat | mitochondrion | 23.58 | 30.4 |
TraesCS4A01G016500.1 | Wheat | mitochondrion | 23.11 | 29.7 |
TraesCS3A01G349200.1 | Wheat | plastid | 17.22 | 29.44 |
TraesCS1A01G222600.1 | Wheat | mitochondrion | 15.57 | 28.57 |
TraesCS6A01G305800.1 | Wheat | mitochondrion | 25.94 | 28.57 |
TraesCS1A01G296500.1 | Wheat | mitochondrion | 15.57 | 26.09 |
TraesCS7A01G185200.1 | Wheat | mitochondrion, plastid | 26.89 | 25.05 |
TraesCS3A01G158800.1 | Wheat | cytosol | 22.88 | 23.95 |
TraesCS2A01G521700.1 | Wheat | plastid | 23.82 | 22.05 |
TraesCS3A01G340600.1 | Wheat | plastid | 20.28 | 20.98 |
Protein Annotations
EnsemblPlants:TraesCS2A01G295000.1 | EnsemblPlantsGene:TraesCS2A01G295000 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:Glutaredoxin |
InterPro:IPR002109 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF189 | PFAM:PF00462 | PFscan:PS51354 |
SEG:seg | SUPFAM:SSF52833 | TIGR:cd03031 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2A:+:507603214..507605110
Molecular Weight (calculated)
45652.0 Da
IEP (calculated)
10.362
GRAVY (calculated)
-0.517
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCISSKLLP PGPGGRTGAA RATVRGRVDH VVSLTSTTYG VLDLQAKHGA TATAGAKDLP LPQEQEKPIS REWKRASARR PPPLVVPDAK KPAPAPKPES
101: GMEVINAWEI MAGLEDADSP AKKPAKPGRW SPARVLAMAL SSPKRSSTKR RNTPGKENSP LQRCSGKENS KPSDVADEDR VLRPYNSIDN SKLSRASKRF
201: SPGSARVARK PNAAETGGMS SSRRSLSPLF DPELLASIER ELSEEGAHIK RVIGSEKPKQ PKVIPAIVAE GKCPPGGADA VVLYTTTLRG IRKTFEDCNA
301: VRAVIEAHDV KVIERDVSMD SGYREELRLL LGGRELRVPA VFVRGKHVGG AAEVTRMEEE GKLKALLQGL PRARVWCAGC AGVRFVMCRG CNGSRKVRVD
401: GERKETVQCG ECNENGLVRC PICS
101: GMEVINAWEI MAGLEDADSP AKKPAKPGRW SPARVLAMAL SSPKRSSTKR RNTPGKENSP LQRCSGKENS KPSDVADEDR VLRPYNSIDN SKLSRASKRF
201: SPGSARVARK PNAAETGGMS SSRRSLSPLF DPELLASIER ELSEEGAHIK RVIGSEKPKQ PKVIPAIVAE GKCPPGGADA VVLYTTTLRG IRKTFEDCNA
301: VRAVIEAHDV KVIERDVSMD SGYREELRLL LGGRELRVPA VFVRGKHVGG AAEVTRMEEE GKLKALLQGL PRARVWCAGC AGVRFVMCRG CNGSRKVRVD
401: GERKETVQCG ECNENGLVRC PICS
001: MGCVSSKLGK KKLIREIRVN NGGDHIVSLT STTYGHLDLD ERAETSPKSL EVTKGEVFES EIIPRRSIKR DDPEIINTWE LMEDLEDSMH VSNPQKISPK
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9LZC2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.