Factsheet for Os04t0412800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G073040.1	Barley	cytosol	80.8	86.19
TraesCS2D01G292800.1	Wheat	mitochondrion	81.03	85.61
TraesCS2A01G295000.1	Wheat	mitochondrion	80.8	85.38
TraesCS2B01G311500.1	Wheat	mitochondrion	80.13	85.07
EES10743	Sorghum	cytosol	84.15	83.59
Zm00001d003779_P001	Maize	cytosol	82.59	82.77
Bra005786.1-P	Field mustard	cytosol	13.39	55.05
CDY11274	Canola	cytosol	13.39	55.05
CDX80893	Canola	cytosol	12.72	52.29
GSMUA_Achr2P20360_001	Banana	cytosol	31.47	51.27
CDY14169	Canola	cytosol	26.12	47.76
VIT_08s0007g03220.t01	Wine grape	cytosol	37.72	42.46
CDY04902	Canola	nucleus	32.59	42.07
Bra028812.1-P	Field mustard	nucleus	32.59	41.83
PGSC0003DMT400023120	Potato	cytosol	37.28	41.75
Solyc09g009860.1.1	Tomato	cytosol	37.05	41.6
Os07t0159900-01	Rice	mitochondrion	22.99	40.23
Os03t0356400-01	Rice	cytosol	18.08	39.9
AT5G03870.1	Thale cress	cytosol	33.04	38.54
Os07t0659900-01	Rice	cytosol	17.63	37.44
KRH67928	Soybean	cytosol	36.38	35.59
Os02t0102000-00	Rice	cytosol	25.0	34.78
CDX80894	Canola	nucleus	14.96	34.18
Os03t0170800-00	Rice	mitochondrion	23.88	33.23
CDY11275	Canola	nucleus	14.51	32.83
Os03t0648800-00	Rice	mitochondrion	22.1	30.56
Os05t0471350-00	Rice	mitochondrion, plastid	17.19	29.96
Os02t0748800-00	Rice	cytosol, mitochondrion	24.33	29.54
Os01t0829400-01	Rice	mitochondrion	16.52	29.02
Os10t0343900-01	Rice	cytosol	8.48	28.79
Os06t0226100-00	Rice	plastid	24.11	28.2
Os01t0235900-00	Rice	plasma membrane	20.54	23.53
Os04t0641300-01	Rice	cytosol, plastid	22.77	23.02
Os05t0353600-00	Rice	plastid	16.29	21.79
Os08t0171333-00	Rice	plastid	14.73	20.89

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:4335785	EMBL:AK060508	ProteinID:BAF14657.1	ProteinID:BAS89129.1
ProteinID:CAD40594.2	ProteinID:CAD40652.2	ProteinID:EAZ30676.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009506
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:Glutaredoxin	InterPro:IPR002109	EnsemblPlantsGene:Os04g0412800	EnsemblPlants:Os04t0412800-01	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF189	UniProt:Q7XVH0	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00001B0FD3
RefSeq:XP_015635004.1	SEG:seg	:	:	:	:

Description

GRX-like protein 8, glutaredoxin-like protein 8Thioredoxin fold domain containing protein. (Os04t0412800-01)

Coordinates

chr4:+:20393546..20395280

Molecular Weight (calculated)

47776.4 Da

IEP (calculated)

10.188

GRAVY (calculated)

-0.462

Length

448 amino acids

Sequence
(BLAST)

001: MGCISSKLLP PGPGDARGGS GARATVRGRV DHVVSLTSTT YGVLDLHPKH GAAAAAAAAA AAAAAVACQE KVQETQAQPP QEDKPISREW KRARPPPLVV
101: PSAKKPAPAG KLDSGLEVIN AWEIMAGLED ADAADASPAK KPAKQPSRWS PARVIAMALP SPKKSATKRR NTPGKENSPL QRCSGNNNSS NINKTGDVNV
201: DRVLRPYNSI DNSKLSRMSK RFSPVSARIV RKPGPPETGG GMSSSRRSLS PLFDPELLAS IERELSEEGA HIKRMVGSEK PKHPKAAPPA MVAEGKCPPG
301: GADAVVLYTT TLRGIRRTFE ECNAVRAAIE AHDVKLIERD VSMDSGYREE LRLLLGGREV RVPAVFVRGR HVGGAAEVTK LEEEGKLKAL LQGLPRARVW
401: CAGCAGVRFV MCRDCNGSRK VRVDGERKET VQCGECNENG LVRCPICS

Best Arabidopsis Sequence Match ( AT5G03870.1 )
(BLAST)

001: MGCVSSKLGK KKLIREIRVN NGGDHIVSLT STTYGHLDLD ERAETSPKSL EVTKGEVFES EIIPRRSIKR DDPEIINTWE LMEDLEDSMH VSNPQKISPK
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9LZC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.