Factsheet for Zm00001d038018_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006417_P002
Zm00001d021532_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	Zm00001d006417_P002	AT1G30860.1	21798944
AT5G58530.1	Zm00001d021532_P001	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18035	Sorghum	mitochondrion	89.12	88.75
Zm00001d010509_P001	Maize	mitochondrion	84.94	82.19
TraesCS1D01G224200.1	Wheat	mitochondrion	69.87	72.29
TraesCS1B01G235900.1	Wheat	mitochondrion	69.04	71.43
TraesCS1A01G222600.1	Wheat	mitochondrion	69.04	71.43
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	69.04	68.46
Zm00001d012471_P001	Maize	cytosol, plastid	27.62	57.39
Os05t0353600-00	Rice	plastid	74.9	53.43
GSMUA_Achr5P29410_001	Banana	mitochondrion	48.95	50.65
GSMUA_Achr5P14280_001	Banana	plastid	46.44	48.47
GSMUA_Achr4P18760_001	Banana	plastid	47.28	47.88
Zm00001d010594_P001	Maize	plastid	46.03	44.18
Bra002640.1-P	Field mustard	cytosol	21.76	44.07
Zm00001d029202_P001	Maize	cytosol	35.98	43.43
GSMUA_Achr6P32840_001	Banana	cytosol	42.26	43.35
CDX74801	Canola	cytosol	29.29	41.92
Zm00001d043006_P001	Maize	plastid	49.79	41.18
GSMUA_Achr7P18270_001	Banana	mitochondrion	44.77	41.15
Zm00001d022403_P001	Maize	cytosol, plastid	34.31	40.39
Zm00001d026424_P001	Maize	cytosol	20.92	40.0
Zm00001d038445_P001	Maize	cytosol	46.03	39.71
GSMUA_Achr6P23380_001	Banana	mitochondrion	38.91	39.57
KRH14919	Soybean	plastid	39.75	39.26
KRH30192	Soybean	plastid	36.4	37.66
Bra020363.1-P	Field mustard	cytosol, plastid	39.33	37.3
KRH31178	Soybean	plastid	35.56	37.12
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	38.08	36.99
KRG97693	Soybean	plastid	35.15	36.68
PGSC0003DMT400078241	Potato	cytosol, plastid	36.82	36.67
CDY59509	Canola	cytosol, plastid	38.49	36.51
CDY32696	Canola	cytosol, plastid	38.08	36.26
PGSC0003DMT400078242	Potato	cytosol, plastid	38.08	35.83
Solyc06g082180.1.1	Tomato	cytosol, plastid	37.66	35.43
CDY32794	Canola	peroxisome	38.08	35.14
KRG98239	Soybean	plastid	34.31	34.75
Zm00001d012904_P001	Maize	cytosol	17.99	34.68
VIT_13s0067g01650.t01	Wine grape	plastid	40.59	32.99
KRH72724	Soybean	plastid	38.49	32.74
CDX74802	Canola	cytosol, mitochondrion	33.05	31.98
Bra004972.1-P	Field mustard	mitochondrion	33.05	31.98
AT5G58530.1	Thale cress	cytosol, plastid	36.4	31.87
KRH73271	Soybean	plastid	39.75	31.56
CDY18861	Canola	mitochondrion	32.22	31.3
KRH17081	Soybean	plastid	38.49	30.46
Bra004971.1-P	Field mustard	plastid	31.8	30.04
Zm00001d007885_P001	Maize	mitochondrion	28.03	29.91
Zm00001d018827_P001	Maize	mitochondrion	28.45	25.28
Zm00001d033205_P001	Maize	mitochondrion	36.4	25.14
Zm00001d013668_P001	Maize	mitochondrion	35.56	24.29
Zm00001d027853_P001	Maize	plastid	32.22	23.62
Zm00001d054094_P001	Maize	cytosol	29.29	22.44
Zm00001d024469_P001	Maize	cytosol, plastid	33.89	22.07
Zm00001d018058_P001	Maize	plastid	34.31	21.75
Zm00001d052252_P001	Maize	mitochondrion	33.05	21.47
Solyc06g082170.2.1	Tomato	cytosol, plastid	35.98	20.72
Zm00001d002123_P001	Maize	plastid	35.98	20.28
Zm00001d037218_P001	Maize	plastid	33.47	18.69
Zm00001d044841_P001	Maize	plastid	33.89	18.54
Zm00001d039270_P001	Maize	cytosol	29.29	17.63
Zm00001d003779_P001	Maize	cytosol	29.71	15.88

Protein Annotations

EntrezGene:103630274	Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A1D6M2R8	ProteinID:AQK85477.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF78	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000221A115	EnsemblPlantsGene:Zm00001d038018	EnsemblPlants:Zm00001d038018_P001
EnsemblPlants:Zm00001d038018_T001	SEG:seg	:	:	:	:

Description

Glutaredoxin family protein

Coordinates

chr6:-:145331645..145332719

Molecular Weight (calculated)

24942.8 Da

IEP (calculated)

8.700

GRAVY (calculated)

0.036

Length

239 amino acids

Sequence
(BLAST)

001: MWLSWVRRSK TSGRLTQSPS FSAPTVSSPT GKDHPGIGAV LDDDAAVGSG DGAGAGSKIV LHRARSASRL RACKSFAAAA EAAAASVAGE RHVVLYFTSL
101: HAVRATFEGC LTVRTILRGL RVSVDERDVS MDAAYLAELC ALMRRDRPSL PQLFVGGRLL GDAEEVLLLH ESGELRRVLA SAVQAAPAPC ASCGGSRFVP
201: CGACCGSHRR FSDKTGGFRV CTSCNENGLV RCAACSSGS

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.