CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH24106
KRH27822
KRH29080
KRH77666

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31240.1	KRH24106	AT1G50420.1	21798944
AT1G31240.1	KRH27822	AT1G50420.1	21798944
AT1G31240.1	KRH29080	AT1G50420.1	21798944
AT1G31240.1	KRH77666	AT1G50420.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27180	Soybean	plastid	38.46	65.22
KRH72903	Soybean	cytosol	66.3	62.41
VIT_01s0011g01670.t01	Wine grape	nucleus	29.67	31.89
PGSC0003DMT400026858	Potato	mitochondrion, nucleus	27.11	27.31
Os02t0699900-01	Rice	cytosol, nucleus, plastid	23.81	27.2
Solyc02g069170.1.1	Tomato	mitochondrion	27.11	26.43
AT1G31240.1	Thale cress	nucleus	26.74	26.35
Bra023170.1-P	Field mustard	nucleus	26.01	25.63
EES07408	Sorghum	mitochondrion, plastid	20.88	23.08
Zm00001d000165_P001	Maize	mitochondrion	20.51	22.49
CDY02371	Canola	cytosol	18.68	21.34
Zm00001d050853_P001	Maize	cytosol	15.75	18.78
KRH19914	Soybean	cytosol	24.18	18.64
KRH45059	Soybean	cytosol	25.27	18.11
KRH32528	Soybean	cytosol	23.44	17.98
KRH01313	Soybean	cytosol	24.54	17.59

Protein Annotations

EMBL:ACUP02009071	EnsemblPlants:KRH17259	EnsemblPlantsGene:GLYMA_14G209200	EntrezGene:102667709	Gene3D:1.10.20.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046982	InterPro:BTP	InterPro:Histone-fold	InterPro:IPR009072
PANTHER:PTHR12321	PANTHER:PTHR12321:SF38	PFAM:PF07524	ProteinID:KRH17259	ProteinID:KRH17259.1	SEG:seg
SMART:SM00576	UniParc:UPI000189D067	UniProt:A0A0R0GQV2	MapMan:15.3.5.3.8	:	:

Description

hypothetical protein

Coordinates

chr14:+:47466917..47468975

Molecular Weight (calculated)

30134.5 Da

IEP (calculated)

10.445

GRAVY (calculated)

-0.474

Length

273 amino acids

Sequence
(BLAST)

001: MNPMENNSST NATSKLPRRA KRKKKGLGVN VAQVADNTSE FSFAIAKTAV AQICQSVGYK ISKHHALEAL TNVSTRYMEA IVRSASSFAN ASNRTDSNLF
101: DLINGIHDLC SVLGFPGGSM IHKSNLLGSS ALKEIMNFVN LSNKIPFAKP IPFRNVSEVT IDSGTSMCLS KQAKTHIPRW LPDFPKENCN RVLVKERKCD
201: EKLWEHLLAA EENSGLLRSN DINGKEGKNA RMELPKGRER MKFKIRGEKK KHGGLGVNMM NGDCKGKTSV LEL

Best Arabidopsis Sequence Match ( AT1G31240.1 )
(BLAST)

001: MKRRRRNSKL KFEETSDQSP TSTAEFSFSL TKIAVSQICQ SIGYKATDAS ALNTLTLTTT KFLQSLAELA SSFSNTANRT EVNLFDIVNG LQDIALSTSD
101: CFPGGSTVHD IESQCLIKSA VLRNLSDFVT YAPEIPFAKP LPRRERDGSF GGDLDHVAVT RSVDVTSVPA WLPPFPDSSL CSDRCSKDNR SDHLWENSDS
201: VIRREILPES LKSKSGGRLP VMRDKVRFKM EQRDWSSGGD TRLERSRDNN NGESGRDLEV KKKIREGYTY CAGEWPF

Arabidopsis Description

At1g31240 [Source:UniProtKB/TrEMBL;Acc:Q9SA19]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.