Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G50420.1 | KRH03283 | AT4G22220.1 | 21798944 |
| AT1G50420.1 | KRH19966 | AT4G22220.1 | 21798944 |
| AT1G50420.1 | KRH54391 | AT4G22220.1 | 21798944 |
| AT1G50420.1 | KRH57077 | AT4G22220.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77666 | Soybean | endoplasmic reticulum, nucleus, peroxisome, plastid | 90.91 | 92.47 |
| KRH29080 | Soybean | cytosol | 69.56 | 72.31 |
| KRH24106 | Soybean | cytosol, nucleus, peroxisome | 69.13 | 71.87 |
| VIT_06s0009g02390.t01 | Wine grape | cytosol | 68.71 | 68.57 |
| Solyc12g099900.1.1 | Tomato | nucleus | 67.44 | 68.16 |
| PGSC0003DMT400011839 | Potato | cytosol | 67.23 | 67.95 |
| CDY45059 | Canola | cytosol | 42.92 | 66.78 |
| PGSC0003DMT400058477 | Potato | cytosol | 66.38 | 66.53 |
| CDY68881 | Canola | cytosol | 34.25 | 66.39 |
| Solyc01g008910.2.1 | Tomato | cytosol | 66.17 | 65.76 |
| Bra014251.1-P | Field mustard | cytosol | 59.62 | 63.37 |
| Bra018848.1-P | Field mustard | cytosol | 58.14 | 62.5 |
| CDY03601 | Canola | cytosol | 58.99 | 62.14 |
| CDY22795 | Canola | cytosol, plastid | 57.93 | 61.71 |
| AT1G50420.1 | Thale cress | cytosol | 62.58 | 61.41 |
| GSMUA_Achr8P09690_001 | Banana | cytosol | 55.81 | 59.19 |
| HORVU3Hr1G106260.1 | Barley | cytosol | 20.93 | 55.31 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome, plastid | 54.33 | 54.33 |
| KRH29971 | Soybean | cytosol | 48.84 | 52.26 |
| Os01t0948200-00 | Rice | cytosol | 48.2 | 51.58 |
| TraesCS3A01G487500.1 | Wheat | cytosol, plastid | 48.41 | 51.23 |
| TraesCS3B01G535100.1 | Wheat | cytosol | 48.84 | 50.99 |
| KRH62871 | Soybean | cytosol | 47.57 | 50.79 |
| Zm00001d042127_P001 | Maize | plastid | 47.78 | 50.56 |
| TraesCS3D01G482600.1 | Wheat | cytosol | 48.63 | 50.55 |
| Zm00001d011881_P001 | Maize | cytosol | 47.36 | 49.89 |
| EES02045 | Sorghum | cytosol, plastid | 47.57 | 49.02 |
| Os06t0211500-00 | Rice | cytosol | 15.86 | 39.27 |
| Os12t0138100-00 | Rice | cytosol | 39.75 | 38.21 |
| Os11t0141500-00 | Rice | cytosol | 39.53 | 38.01 |
| Zm00001d023248_P001 | Maize | cytosol | 39.75 | 37.15 |
| TraesCS5A01G135000.1 | Wheat | mitochondrion | 41.44 | 35.32 |
| TraesCS5B01G133800.1 | Wheat | mitochondrion | 41.01 | 35.14 |
| HORVU5Hr1G043310.1 | Barley | cytosol | 40.59 | 34.91 |
| TraesCS5D01G139500.1 | Wheat | mitochondrion | 41.01 | 34.7 |
| HORVU2Hr1G113480.1 | Barley | cytosol | 22.62 | 33.97 |
| HORVU2Hr1G113490.1 | Barley | cytosol | 22.62 | 33.97 |
| EES16518 | Sorghum | cytosol | 31.71 | 33.33 |
| TraesCS6D01G055100.1 | Wheat | cytosol | 21.78 | 32.8 |
| KXG22822 | Sorghum | mitochondrion | 39.75 | 32.58 |
| TraesCS2D01G534700.1 | Wheat | cytosol | 21.56 | 32.48 |
| TraesCS2D01G055700.1 | Wheat | extracellular, golgi, mitochondrion, plastid | 21.14 | 32.05 |
| TraesCS4B01G133000.1 | Wheat | cytosol, nucleus, plastid | 9.73 | 31.51 |
| TraesCS2A01G532900.1 | Wheat | cytosol | 27.91 | 30.7 |
| KRG92263 | Soybean | cytosol | 25.58 | 30.33 |
| Os11t0141700-00 | Rice | cytosol | 32.35 | 30.24 |
| Os12t0138200-00 | Rice | cytosol | 32.35 | 30.0 |
| EES09233 | Sorghum | cytosol | 30.87 | 29.98 |
| TraesCS4A01G185900.1 | Wheat | cytosol | 27.48 | 29.15 |
| CDY37137 | Canola | plastid | 58.56 | 29.04 |
| HORVU4Hr1G026010.3 | Barley | cytosol | 27.27 | 28.92 |
| OQU77884 | Sorghum | plasma membrane | 27.27 | 28.35 |
| Zm00001d052463_P001 | Maize | cytosol | 31.08 | 28.11 |
| HORVU2Hr1G113360.1 | Barley | cytosol | 27.91 | 27.79 |
| TraesCS4D01G127800.2 | Wheat | mitochondrion | 27.91 | 27.79 |
| KRH29015 | Soybean | cytosol | 16.7 | 27.72 |
| TraesCSU01G014000.1 | Wheat | cytosol | 17.12 | 27.55 |
| Zm00001d037901_P001 | Maize | cytosol, peroxisome, plastid | 26.85 | 27.49 |
| TraesCS2B01G562400.1 | Wheat | cytosol | 27.27 | 27.22 |
| KRH34954 | Soybean | cytosol | 23.04 | 26.91 |
| Zm00001d052464_P001 | Maize | cytosol, plasma membrane, plastid | 27.7 | 26.9 |
| KRH29089 | Soybean | mitochondrion | 24.95 | 26.7 |
| KRH63032 | Soybean | cytosol | 28.33 | 26.64 |
| KRH57194 | Soybean | cytosol | 28.75 | 26.61 |
| KRH03910 | Soybean | cytosol | 28.75 | 26.46 |
| OQU77885 | Sorghum | cytosol | 26.43 | 25.93 |
| KRH24117 | Soybean | plastid | 24.1 | 25.62 |
| KRH34544 | Soybean | cytosol | 26.43 | 25.61 |
| KRH54840 | Soybean | cytosol | 27.27 | 25.54 |
| Zm00001d023247_P001 | Maize | plastid | 29.81 | 25.18 |
| KRH42544 | Soybean | cytosol, nucleus, plastid | 27.06 | 24.76 |
| KRH13057 | Soybean | cytosol | 28.75 | 24.5 |
| KRH70202 | Soybean | cytosol | 24.52 | 24.37 |
| KRG91825 | Soybean | nucleus | 23.89 | 24.3 |
| KRH58636 | Soybean | nucleus | 26.85 | 24.28 |
| KRH08555 | Soybean | cytosol | 24.1 | 24.2 |
| GSMUA_Achr11P... | Banana | cytosol | 53.28 | 22.87 |
| KRG97933 | Soybean | nucleus | 27.7 | 22.43 |
| KRH44884 | Soybean | cytosol | 20.3 | 22.17 |
| KRH30942 | Soybean | cytosol | 27.27 | 21.68 |
| Os05t0378200-00 | Rice | cytosol | 25.16 | 21.6 |
| Os05t0378500-00 | Rice | plastid | 25.37 | 21.43 |
| KRG94590 | Soybean | plastid | 30.44 | 21.15 |
| KRH19587 | Soybean | cytosol | 23.47 | 21.1 |
| KRH06900 | Soybean | plastid | 30.23 | 20.85 |
| KRH32212 | Soybean | cytosol | 23.04 | 20.3 |
| KRH24039 | Soybean | cytosol | 19.87 | 19.54 |
| KRH03976 | Soybean | mitochondrion, nucleus | 26.85 | 18.98 |
| KRH57249 | Soybean | plastid | 26.0 | 18.52 |
| KRH40615 | Soybean | nucleus, plastid | 28.12 | 16.16 |
| KRH00551 | Soybean | nucleus, plastid | 27.91 | 15.68 |
| Os12t0138166-00 | Rice | endoplasmic reticulum, extracellular | 1.27 | 1.7 |
| Os11t0141550-01 | Rice | cytosol | 0.42 | 1.55 |
Protein Annotations
| EntrezGene:100819988 | MapMan:15.5.12 | EMBL:ACUP02006734 | EnsemblPlantsGene:GLYMA_11G016100 | GO:GO:0000989 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0003712 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009987 |
| GO:GO:0043565 | UniProt:I1LG67 | InterPro:IPR005202 | EnsemblPlants:KRH27822 | ProteinID:KRH27822 | ProteinID:KRH27822.1 |
| PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF13 | InterPro:Scarecrow-like_3 | InterPro:TF_GRAS |
| UniParc:UPI000233C6E3 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:1133531..1136001
Molecular Weight (calculated)
52978.8 Da
IEP (calculated)
5.951
GRAVY (calculated)
-0.141
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MESMFQEEGS SSVTSSSSLQ FFSMMSLSLS PSLGSSPYQM KCEERGLVLI HLLLAGANFV ATGDLQNANL TLEQISQHAS LDGDTMQRIA SYFSEALADR
101: ILRTWPGIHR ALNSNRIPMV SDEILVQKLF FELLPFLKFS YILTNQAIVE AMEGEKMVHV IDLNAAGPAQ WIALLQVLSA RSEGPPHLKI TGVHHQKEVL
201: DQMAHKLTEE AEKLDIPFQF NPVLSKLENL DFEKLGVKTG EALAISSIMQ LHSLLALDDD ASRRKLPLLS KNSNAIHLQK GLLTNQNTLG DLLDGYSPSP
301: DSASASASSS PASSSASMNS ESFLNALWGL SPKVMVVTEQ DFNHNCLTMM ERLAEALFSY AAYFDCLEST VSRASLDRIK LEKMLFGEEI KNIIACEGCE
401: RKKRHERMDR WIQRLDFSGF ANVPISYYGM LQGRRFLQTY GCEGYKMKEE CGRVMMCWQE RPLFFITAWT PRK
101: ILRTWPGIHR ALNSNRIPMV SDEILVQKLF FELLPFLKFS YILTNQAIVE AMEGEKMVHV IDLNAAGPAQ WIALLQVLSA RSEGPPHLKI TGVHHQKEVL
201: DQMAHKLTEE AEKLDIPFQF NPVLSKLENL DFEKLGVKTG EALAISSIMQ LHSLLALDDD ASRRKLPLLS KNSNAIHLQK GLLTNQNTLG DLLDGYSPSP
301: DSASASASSS PASSSASMNS ESFLNALWGL SPKVMVVTEQ DFNHNCLTMM ERLAEALFSY AAYFDCLEST VSRASLDRIK LEKMLFGEEI KNIIACEGCE
401: RKKRHERMDR WIQRLDFSGF ANVPISYYGM LQGRRFLQTY GCEGYKMKEE CGRVMMCWQE RPLFFITAWT PRK
001: MVAMFQEDNG TSSVASSPLQ VFSTMSLNRP TLLASSSPFH CLKDLKPEER GLYLIHLLLT CANHVASGSL QNANAALEQL SHLASPDGDT MQRIAAYFTE
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
Arabidopsis Description
SCL3Scarecrow-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPR8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.