CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34544	Soybean	cytosol	91.23	74.59
KRH63032	Soybean	cytosol	82.96	65.81
KRH54840	Soybean	cytosol	82.71	65.35
OQU87235	Sorghum	extracellular	41.6	56.27
VIT_11s0016g04630.t01	Wine grape	plastid	73.43	55.08
TraesCS3A01G233000.1	Wheat	plasma membrane	58.9	46.91
Os01t0646300-01	Rice	cytosol	57.39	46.26
Zm00001d044065_P001	Maize	cytosol	54.89	46.11
TraesCS3B01G262400.1	Wheat	mitochondrion, plastid	59.4	44.8
TraesCS3D01G220100.3	Wheat	cytosol, endoplasmic reticulum, plasma membrane	59.15	43.95
TraesCS4B01G342800.1	Wheat	cytosol	46.37	42.05
TraesCS5A01G511900.1	Wheat	cytosol	45.86	41.97
HORVU3Hr1G058100.1	Barley	plastid	58.9	41.74
GSMUA_Achr6P34550_001	Banana	mitochondrion, nucleus, peroxisome, plastid	60.9	39.77
KRH42544	Soybean	cytosol, nucleus, plastid	49.87	38.49
TraesCS1A01G413800.1	Wheat	cytosol, nucleus, plastid	46.37	38.38
KRH58636	Soybean	nucleus	49.87	38.05
TraesCS4D01G338800.1	Wheat	cytoskeleton, cytosol, peroxisome, plastid	46.62	38.04
Os05t0574900-01	Rice	plasma membrane	47.62	38.0
TraesCS1D01G421200.1	Wheat	cytosol	46.62	36.61
KRG97933	Soybean	nucleus	52.13	35.62
TraesCS1B01G443800.1	Wheat	cytosol	45.61	35.2
Zm00001d009646_P001	Maize	plastid	41.85	35.16
KRH30942	Soybean	cytosol	52.38	35.13
HORVU1Hr1G090800.1	Barley	mitochondrion	46.87	34.89
KRH29015	Soybean	cytosol	24.31	34.04
KXG23987	Sorghum	cytosol	41.6	31.62
KRH29089	Soybean	mitochondrion	32.83	29.64
KRH34954	Soybean	cytosol	29.57	29.14
KRH24117	Soybean	plastid	31.33	28.09
KRH29080	Soybean	cytosol	31.83	27.91
KRH24106	Soybean	cytosol, nucleus, peroxisome	31.58	27.69
KRH57194	Soybean	cytosol	35.09	27.4
KRH03910	Soybean	cytosol	34.34	26.65
KRH62871	Soybean	cytosol	29.57	26.64
KRH29971	Soybean	cytosol	28.57	25.79
KRH27822	Soybean	nucleus, plastid	30.33	25.58
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	29.57	25.38
KRG91825	Soybean	nucleus	29.07	24.95
KRH44884	Soybean	cytosol	26.32	24.25
KRH19587	Soybean	cytosol	31.58	23.95
KRH70202	Soybean	cytosol	28.57	23.95
KRH24039	Soybean	cytosol	28.57	23.7
KRH06900	Soybean	plastid	40.6	23.62
KRH13057	Soybean	cytosol	32.83	23.6
KRH08555	Soybean	cytosol	27.82	23.57
KRG94590	Soybean	plastid	40.1	23.49
KRH32212	Soybean	cytosol	30.83	22.91
KRH57249	Soybean	plastid	34.09	20.48
KRH03976	Soybean	mitochondrion, nucleus	34.34	20.48
KRH40615	Soybean	nucleus, plastid	34.84	16.89
KRH00551	Soybean	nucleus, plastid	34.59	16.39

Protein Annotations

MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.6.2.1	UniProt:A0A0R0ENH4	EMBL:ACUP02012736	EnsemblPlantsGene:GLYMA_20G200500
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719	GO:GO:0009723	GO:GO:0009737
GO:GO:0009791	GO:GO:0009863	GO:GO:0009867	GO:GO:0009938	GO:GO:0009987	GO:GO:0010187
GO:GO:0042538	GO:GO:0043565	GO:GO:2000033	GO:GO:2000377	InterPro:IPR005202	EnsemblPlants:KRG92263
ProteinID:KRG92263	ProteinID:KRG92263.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF7
InterPro:TF_GRAS	UniParc:UPI0006EDC913	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:43782232..43783431

Molecular Weight (calculated)

44503.4 Da

IEP (calculated)

6.650

GRAVY (calculated)

-0.058

Length

399 amino acids

Sequence
(BLAST)

001: MSLPSHYHLS SDLPDFATTV EEHSGIRLIH TLMTCADSLQ RGHFSFAASL IQNMQGLLAH VNTNCGIGKV AACFIDALRR RISNKFPASS AYENDVLYHN
101: YYEACPYLKF AHFTANQAIL EAFNGHDCVH VIDFNLMQGL QWPALIQALA LRPGGPPLLR LTGIGPPSAE NRDNLREIGL RLAELARSVN VRFAFRGVAA
201: WRLEDVKPWM LQVSPNEAVA VNSIMQLHRL TAVKSAVEEV LGWIRILNPK IVTVVEQEAN HNGEGFLERF TEALHYYSSV FDSLDACPVE PDKAALAEMY
301: LQREICNVVC CEGPARLERH EPLAKWRDRL GKAGFRALHL GFNAYKQASM LLTLFSAEGF CVQENQGSLT LGWHSRPLIA ASAWQAAPLG DDETLRFEH

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.