CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91825	Soybean	nucleus	97.53	84.95
VIT_18s0076g00200.t01	Wine grape	cytosol	63.7	79.14
KRH08555	Soybean	cytosol	88.4	76.01
KRH70202	Soybean	cytosol	85.93	73.11
PGSC0003DMT400023877	Potato	cytosol	62.22	61.16
Solyc11g017100.1.1	Tomato	cytosol	61.23	52.1
GSMUA_Achr6P17870_001	Banana	cytosol	55.31	50.22
GSMUA_Achr10P...	Banana	nucleus	52.84	48.75
OQU81603	Sorghum	cytosol	35.8	40.5
HORVU0Hr1G004640.1	Barley	mitochondrion, nucleus, plastid	43.95	37.16
TraesCS2A01G304000.1	Wheat	cytosol, mitochondrion, nucleus	42.96	36.25
TraesCS2B01G320700.1	Wheat	cytosol, mitochondrion, nucleus	43.21	36.01
Zm00001d003657_P001	Maize	cytosol, mitochondrion, nucleus	44.2	35.94
Zm00001d025133_P001	Maize	cytosol	43.7	35.83
TraesCS2D01G302600.1	Wheat	cytosol, mitochondrion, nucleus	42.72	35.74
Os04t0432100-00	Rice	nucleus	43.46	34.92
KRH29015	Soybean	cytosol	23.7	33.68
KRG92263	Soybean	cytosol	29.14	29.57
KRH29089	Soybean	mitochondrion	31.6	28.96
KRH24117	Soybean	plastid	29.88	27.19
KRH29080	Soybean	cytosol	28.89	25.71
KRH24106	Soybean	cytosol, nucleus, peroxisome	28.64	25.49
KRH24039	Soybean	cytosol	29.63	24.95
KRH57194	Soybean	cytosol	30.86	24.46
KRH34544	Soybean	cytosol	29.14	24.18
KRH03910	Soybean	cytosol	30.62	24.12
KRH42544	Soybean	cytosol, nucleus, plastid	30.62	23.98
KRH54840	Soybean	cytosol	29.88	23.96
KRH63032	Soybean	cytosol	29.63	23.86
KRH58636	Soybean	nucleus	30.62	23.71
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	27.16	23.66
KRH29971	Soybean	cytosol	25.19	23.08
KRH27822	Soybean	nucleus, plastid	26.91	23.04
KRH62871	Soybean	cytosol	25.19	23.02
KRH19587	Soybean	cytosol	29.14	22.43
KRH32212	Soybean	cytosol	28.89	21.79
KRG97933	Soybean	nucleus	30.37	21.06
KRH13057	Soybean	cytosol	28.64	20.9
KRH30942	Soybean	cytosol	30.37	20.67
KRG94590	Soybean	plastid	33.83	20.12
KRH06900	Soybean	plastid	34.07	20.12
KRH44884	Soybean	cytosol	21.48	20.09
KRH03976	Soybean	mitochondrion, nucleus	32.1	19.43
KRH57249	Soybean	plastid	31.6	19.28
KRH40615	Soybean	nucleus, plastid	33.33	16.4
KRH00551	Soybean	nucleus, plastid	33.58	16.15

Protein Annotations

EMBL:ACUP02006645	EnsemblPlants:KRH34954	EnsemblPlantsGene:GLYMA_10G215000	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS
ncoils:Coil	PANTHER:PTHR31636	PANTHER:PTHR31636:SF19	PFAM:PF03514	PFscan:PS50985	ProteinID:KRH34954
ProteinID:KRH34954.1	UniParc:UPI0006EDA0E0	UniProt:A0A0R0HWZ0	MapMan:15.5.12	:	:

Description

hypothetical protein

Coordinates

chr10:+:44716215..44717432

Molecular Weight (calculated)

46007.0 Da

IEP (calculated)

6.332

GRAVY (calculated)

-0.273

Length

405 amino acids

Sequence
(BLAST)

001: MREQMLRQDH RRKGVVEDGN GLPLIHLLLS TATSVDDNNM DSSLENLTDL YQTVSVTGDS VQRVVAYFVD GLAARLLTKK SPFYDMLMEE PTTEEEFLAF
101: TDLYRVSPYF QFAHFTANQA ILEAFEKEEE RNNRALHVID FDVSYGFQWP SLIQSLSEKA TSGNRISLRI TGFGKSLKEL QETESRLVSF SKGFGSLVFE
201: FQGLLRGSRV INLRKKKNET VAVNLVSYLN TLSCFMKISD TLGFVHSLNP SIVVVVEQEG SRSPRSFLSR FTDSLHYFAA MFDSLDDCLP LESAERLRIE
301: KKLLGKEIKS MLNNDVDGGV DCPKYERMEA WKARMENHGF VATKISSKSM IQAKLLLKMR THFCPLQFEE EGGGGFRVSE RDEGRAISLG WQNRFLLTVS
401: AWQSV

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.