CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92263	Soybean	cytosol	74.59	91.23
KRH54840	Soybean	cytosol	80.53	77.82
KRH63032	Soybean	cytosol	79.92	77.53
VIT_11s0016g04630.t01	Wine grape	plastid	69.88	64.1
OQU87235	Sorghum	extracellular	33.81	55.93
Os01t0646300-01	Rice	cytosol	48.77	48.08
TraesCS3A01G233000.1	Wheat	plasma membrane	48.98	47.7
Zm00001d044065_P001	Maize	cytosol	45.9	47.16
TraesCS3B01G262400.1	Wheat	mitochondrion, plastid	49.39	45.56
KRH42544	Soybean	cytosol, nucleus, plastid	47.54	44.87
GSMUA_Achr6P34550_001	Banana	mitochondrion, nucleus, peroxisome, plastid	56.15	44.84
KRH58636	Soybean	nucleus	47.95	44.74
TraesCS3D01G220100.3	Wheat	cytosol, endoplasmic reticulum, plasma membrane	49.18	44.69
HORVU3Hr1G058100.1	Barley	plastid	48.57	42.1
KRG97933	Soybean	nucleus	50.0	41.78
TraesCS4B01G342800.1	Wheat	cytosol	37.3	41.36
TraesCS5A01G511900.1	Wheat	cytosol	36.68	41.05
KRH30942	Soybean	cytosol	50.0	41.01
TraesCS1A01G413800.1	Wheat	cytosol, nucleus, plastid	38.52	39.0
Os05t0574900-01	Rice	plasma membrane	39.55	38.6
TraesCS4D01G338800.1	Wheat	cytoskeleton, cytosol, peroxisome, plastid	38.11	38.04
Zm00001d009646_P001	Maize	plastid	35.66	36.63
TraesCS1D01G421200.1	Wheat	cytosol	37.91	36.42
TraesCS1B01G443800.1	Wheat	cytosol	37.09	35.01
HORVU1Hr1G090800.1	Barley	mitochondrion	37.91	34.51
KRH29015	Soybean	cytosol	19.67	33.68
KXG23987	Sorghum	cytosol	35.45	32.95
KRH29089	Soybean	mitochondrion	28.28	31.22
KRH24117	Soybean	plastid	26.84	29.44
KRH34954	Soybean	cytosol	24.18	29.14
KRH57194	Soybean	cytosol	29.71	28.38
KRH29080	Soybean	cytosol	26.43	28.35
KRH24106	Soybean	cytosol, nucleus, peroxisome	26.23	28.13
KRH03910	Soybean	cytosol	29.1	27.63
KRH44884	Soybean	cytosol	24.18	27.25
KRH13057	Soybean	cytosol	30.53	26.85
KRH62871	Soybean	cytosol	24.18	26.64
KRH27822	Soybean	nucleus, plastid	25.61	26.43
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	24.8	26.02
KRH29971	Soybean	cytosol	23.57	26.02
KRG91825	Soybean	nucleus	24.39	25.59
KRG94590	Soybean	plastid	35.25	25.26
KRH06900	Soybean	plastid	35.45	25.22
KRH24039	Soybean	cytosol	24.59	24.95
KRH19587	Soybean	cytosol	26.64	24.71
KRH70202	Soybean	cytosol	23.77	24.37
KRH08555	Soybean	cytosol	23.36	24.2
KRH32212	Soybean	cytosol	26.23	23.84
KRH57249	Soybean	plastid	29.92	21.99
KRH03976	Soybean	mitochondrion, nucleus	29.92	21.82
KRH40615	Soybean	nucleus, plastid	30.33	17.98
KRH00551	Soybean	nucleus, plastid	30.33	17.58

Protein Annotations

Gene3D:1.10.10.1290	EntrezGene:100803245	MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.6.2.1	EMBL:ACUP02006608
InterPro:DELLA_N_sf	EnsemblPlantsGene:GLYMA_10G190200	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719
GO:GO:0009723	GO:GO:0009737	GO:GO:0009791	GO:GO:0009863	GO:GO:0009867	GO:GO:0009938
GO:GO:0009987	GO:GO:0010187	GO:GO:0042538	GO:GO:0043565	GO:GO:2000033	GO:GO:2000377
UniProt:I1LCF0	InterPro:IPR005202	InterPro:IPR038088	EnsemblPlants:KRH34544	ProteinID:KRH34544	ProteinID:KRH34544.1
PFAM:PF03514	PFAM:PF12041	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF7	SMART:SM01129
InterPro:TF_DELLA_N	InterPro:TF_GRAS	UniParc:UPI00029692B7	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:42312252..42314225

Molecular Weight (calculated)

54190.5 Da

IEP (calculated)

5.189

GRAVY (calculated)

-0.113

Length

488 amino acids

Sequence
(BLAST)

001: MKMISSASNE NKTVVDMDDH LAGLGYKVRS SELCQVAANM ERLENVISST DLSQLASDTT LYDPSNIGLG SWVDTLLSEF DQTASLPLQY DFATDPNHNK
101: QLALVTTVEE DSGIRLVHML MTCADSVQRG DFSFAGSLIE NMQGLLAHVN TNCGIGKVAG YFIDALRRRI SNTLPTSSST YENDVLYHNY YEACPYLKFA
201: HFTANQAILE AFNGHDCVHV IDFNLMQGLQ WPALIQALAL RPGGPPLLRL TGVGPPSAEN RDNLREIGLR LAELARSVNV RFAFRGVAAW RLEDVKPWML
301: QVSLNEAVAV NSIMQLHRVT AVDAAVEEVL SWIRSLNPKI VTVVEQEANH NGEGFLERFT EALHYYSTVF DSLDACPVEP DKAALAEMYL QREICNVVCC
401: EGPARLERHE PLAKWRDRLG KAGFRPLHLG FNAYKQASML LTLFSAEGFC VQENQGSLTL GWHSRPLIAA SAWQAAPLRD DETLRFGH

Best Arabidopsis Sequence Match ( AT5G17490.1 )
(BLAST)

001: MKRSHQETSV EEEAPSMVEK LENGCGGGGD DNMDEFLAVL GYKVRSSDMA DVAQKLEQLE MVLSNDIASS SNAFNDTVHY NPSDLSGWAQ SMLSDLNYYP
101: DLDPNRICDL RPITDDDECC SSNSNSNKRI RLGPWCDSVT SESTRSVVLI EETGVRLVQA LVACAEAVQL ENLSLADALV KRVGLLAASQ AGAMGKVATY
201: FAEALARRIY RIHPSAAAID PSFEEILQMN FYDSCPYLKF AHFTANQAIL EAVTTSRVVH VIDLGLNQGM QWPALMQALA LRPGGPPSFR LTGVGNPSNR
301: EGIQELGWKL AQLAQAIGVE FKFNGLTTER LSDLEPDMFE TRTESETLVV NSVFELHPVL SQPGSIEKLL ATVKAVKPGL VTVVEQEANH NGDVFLDRFN
401: EALHYYSSLF DSLEDGVVIP SQDRVMSEVY LGRQILNLVA TEGSDRIERH ETLAQWRKRM GSAGFDPVNL GSDAFKQASL LLALSGGGDG YRVEENDGSL
501: MLAWQTKPLI AASAWKLAAE LRR

Arabidopsis Description

RGL3DELLA protein RGL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.