CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03910	Soybean	cytosol	94.13	93.58
VIT_17s0000g10300.t01	Wine grape	nucleus	65.36	64.35
Solyc03g110950.1.1	Tomato	cytosol	63.01	60.75
GSMUA_Achr8P01180_001	Banana	nucleus	53.82	60.18
PGSC0003DMT400039455	Potato	cytosol	62.62	60.04
HORVU3Hr1G088820.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.87	46.92
TraesCS3D01G385500.1	Wheat	cytosol	47.55	46.82
TraesCS3B01G424600.1	Wheat	cytosol	47.36	46.63
TraesCS3A01G392400.1	Wheat	cytosol	47.36	46.63
TraesCS3A01G392600.1	Wheat	cytosol	43.25	46.23
TraesCS3D01G385400.1	Wheat	cytosol	46.77	46.23
TraesCS3B01G424500.1	Wheat	cytosol	46.77	46.23
TraesCS3A01G392500.1	Wheat	cytosol	46.77	46.23
HORVU3Hr1G088780.2	Barley	cytosol	46.97	45.2
EES01920	Sorghum	cytosol	45.99	43.76
Zm00001d042472_P001	Maize	cytosol	45.79	43.49
KRG92263	Soybean	cytosol	27.4	35.09
KRH13057	Soybean	cytosol	34.64	31.89
KRH44884	Soybean	cytosol	26.42	31.18
KRH34954	Soybean	cytosol	24.46	30.86
KRH29015	Soybean	cytosol	16.63	29.82
KRH34544	Soybean	cytosol	28.38	29.71
KRH29089	Soybean	mitochondrion	25.64	29.64
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	26.81	29.46
KRH63032	Soybean	cytosol	28.96	29.42
KRH54840	Soybean	cytosol	28.77	29.11
KRH27822	Soybean	nucleus, plastid	26.61	28.75
KRH29080	Soybean	cytosol	25.44	28.57
KRH24117	Soybean	plastid	24.66	28.31
KRH08555	Soybean	cytosol	26.03	28.24
KRH24106	Soybean	cytosol, nucleus, peroxisome	24.85	27.91
KRH62871	Soybean	cytosol	24.07	27.77
KRG91825	Soybean	nucleus	25.24	27.74
KRH70202	Soybean	cytosol	25.83	27.73
KRH58636	Soybean	nucleus	27.79	27.15
KRH42544	Soybean	cytosol, nucleus, plastid	27.4	27.08
KRH29971	Soybean	cytosol	23.09	26.7
KRH06900	Soybean	plastid	35.03	26.09
KRG94590	Soybean	plastid	34.44	25.84
KRG97933	Soybean	nucleus	28.96	25.34
KRH30942	Soybean	cytosol	29.16	25.04
KRH24039	Soybean	cytosol	21.14	22.45
KRH19587	Soybean	cytosol	22.11	21.48
KRH57249	Soybean	plastid	27.2	20.93
KRH32212	Soybean	cytosol	21.72	20.67
KRH03976	Soybean	mitochondrion, nucleus	26.03	19.88
KRH40615	Soybean	nucleus, plastid	27.59	17.13
KRH00551	Soybean	nucleus, plastid	27.79	16.86

Protein Annotations

EntrezGene:100815959	MapMan:15.5.12	MapMan:26.9.2.3	EMBL:ACUP02002815	EnsemblPlantsGene:GLYMA_05G045300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1K082	InterPro:IPR005202
EnsemblPlants:KRH57194	ProteinID:KRH57194	ProteinID:KRH57194.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636
PANTHER:PTHR31636:SF24	InterPro:TF_GRAS	UniParc:UPI000233A889	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:4023950..4025814

Molecular Weight (calculated)

57673.4 Da

IEP (calculated)

6.453

GRAVY (calculated)

-0.165

Length

511 amino acids

Sequence
(BLAST)

001: MAPPPYSAYN GEIDGENLPL AFDIWENLWA YGYYPHQPIS EINSTSTLVD FPFCDGTIVR DNKRVKRTVC FPIYNSINCH SFFNTNNSSS RNSIPKLHFR
101: DHIRTYTQRY LAAEPVEDTN SSESSGGEED GCADGVRLVQ LLIACAEAVA CRDKSHASIL LSELKANALV FGSSFQRVAS CFVQGLIERL NLIQPIGPAG
201: PMMPSMMNIM DVASDEMEEA FRLVYELCPH IQFGHYLANS TILEAFEGES FVHVVDLGMS LGLRHGHQWR GLIQNLAGRV GGERVRRLRI TGVGLCERLQ
301: TIGEELSVYA NNLGVNLEFS VVEKNLENLK PEDIKVREEE VLVVNSILQL HCVVKESRGA LNSVLQMIHG LGPKVLVMVE QDSSHNGPFF LGRFMESLHY
401: YSSIFDSLDV MLPKYDTKRA KMEQFYFAEE IKNIVSCEGP LRMERHERVD QWRRRMSRAG FQAAPIKMVA QAKQWLLKNK VCEGYTVVEE KGCLVLGWKS
501: RPIVAVSCWK C

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.