Factsheet for Solyc03g110950.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039455	Potato	cytosol	96.23	95.68
VIT_17s0000g10300.t01	Wine grape	nucleus	68.3	69.75
KRH57194	Soybean	cytosol	60.75	63.01
KRH03910	Soybean	cytosol	60.75	62.65
GSMUA_Achr8P01180_001	Banana	nucleus	53.21	61.71
HORVU3Hr1G088820.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.34	49.62
TraesCS3D01G385500.1	Wheat	cytosol	47.74	48.75
TraesCS3A01G392400.1	Wheat	cytosol	47.55	48.55
TraesCS3B01G424600.1	Wheat	cytosol	47.36	48.36
TraesCS3B01G424500.1	Wheat	cytosol	46.6	47.78
TraesCS3A01G392500.1	Wheat	cytosol	46.6	47.78
TraesCS3A01G392600.1	Wheat	cytosol	43.02	47.7
TraesCS3D01G385400.1	Wheat	cytosol	46.42	47.58
EES01920	Sorghum	cytosol	47.36	46.74
Zm00001d042472_P001	Maize	cytosol	46.98	46.28
HORVU3Hr1G088780.2	Barley	cytosol	46.23	46.14
Solyc07g043330.1.1	Tomato	plastid	26.23	32.18
Solyc12g099900.1.1	Tomato	nucleus	26.98	30.56
Solyc01g008910.2.1	Tomato	cytosol	26.6	29.62
Solyc07g066250.1.1	Tomato	nucleus	23.21	28.74
Solyc02g094340.1.1	Tomato	nucleus	33.21	25.88
Solyc11g017100.1.1	Tomato	cytosol	22.83	25.42
Solyc10g086380.1.1	Tomato	nucleus	23.58	24.37
Solyc09g066450.1.1	Tomato	cytosol	22.64	24.0
Solyc11g011260.1.1	Tomato	nucleus	25.28	22.79
Solyc10g086370.1.1	Tomato	nucleus	20.75	21.57
Solyc08g080400.1.1	Tomato	plastid	26.23	20.47
Solyc02g085340.1.1	Tomato	cytosol	22.45	19.54
Solyc10g074680.1.1	Tomato	cytosol	27.74	17.8

Protein Annotations

MapMan:15.5.12	MapMan:26.9.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR005202	UniProt:K4BJV8	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636
PANTHER:PTHR31636:SF24	EnsemblPlantsGene:Solyc03g110950.1	EnsemblPlants:Solyc03g110950.1.1	InterPro:TF_GRAS	UniParc:UPI0002768B34	SEG:seg

Description

No Description!

Coordinates

chr3:+:61674859..61676451

Molecular Weight (calculated)

59224.1 Da

IEP (calculated)

6.823

GRAVY (calculated)

-0.162

Length

530 amino acids

Sequence
(BLAST)

001: MIHDMANVFL SLEPCNGDQI GYDPMENSLY LTHHKELSYS LNPYTSVLKR NAPTNNMIIS SLSNDSASFK RLRRTPSLGE SFGSNTTFYS TESSSTGGSL
101: PRIGSSNSVN SLSLQPGIHF RDHVWALNQR YLAAEAFEEA AADIINQEEE NGEGMKLVQL LITCAEAVAC RDKSRASVLL SELRASALVF GTSFQRVASC
201: FMQGLSDRLA LVQPLGTVGY VATPAMNKTD IALEKKEEAL RLLYEICPHI QFGHFVANCL ILEAFEGESF IHVVDLGMSL GLPHGHQWRR LVQSLVNRPG
301: QPPRRLRITA VGQNIEKLQI IGDELEDYAR SLGINLEFSA VESNLENLKP KDIKVYDGEV LVVNSILQLH CVVKESRGAL NSVLQVVHEL SPKILVLVEQ
401: DSSHNGPFFL GRFMEALHYY SAIFDSLDVM LPKYDTRRAK IEQFYFAEEI KNIVSCEGPA RVERHERVDQ WRRRMSRAGF QAAPIKMVSQ AKQWLAKVNG
501: HEGFTITEEK GCLVLGWKSK PIVAASCWKC

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.