Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G385400.1 | Wheat | cytosol | 98.84 | 98.84 |
| TraesCS3B01G424500.1 | Wheat | cytosol | 97.87 | 97.87 |
| TraesCS3A01G392600.1 | Wheat | cytosol | 88.01 | 95.19 |
| HORVU3Hr1G088780.2 | Barley | cytosol | 93.81 | 91.34 |
| TraesCS3A01G392400.1 | Wheat | cytosol | 90.33 | 89.98 |
| EES01920 | Sorghum | cytosol | 79.69 | 76.72 |
| Zm00001d042472_P001 | Maize | cytosol | 79.5 | 76.39 |
| GSMUA_Achr8P01180_001 | Banana | nucleus | 46.81 | 52.95 |
| VIT_17s0000g10300.t01 | Wine grape | nucleus | 50.48 | 50.29 |
| PGSC0003DMT400039455 | Potato | cytosol | 48.36 | 46.9 |
| KRH03910 | Soybean | cytosol | 46.62 | 46.89 |
| KRH57194 | Soybean | cytosol | 46.23 | 46.77 |
| Solyc03g110950.1.1 | Tomato | cytosol | 47.78 | 46.6 |
| TraesCS4A01G466700.1 | Wheat | cytosol, nucleus, peroxisome | 21.28 | 33.74 |
| TraesCS3A01G487500.1 | Wheat | cytosol, plastid | 27.66 | 31.99 |
| TraesCS2A01G200700.1 | Wheat | cytosol | 26.69 | 30.67 |
| TraesCS3A01G233000.1 | Wheat | plasma membrane | 29.59 | 30.54 |
| TraesCS5A01G511900.1 | Wheat | cytosol | 23.4 | 27.75 |
| TraesCS2A01G532900.1 | Wheat | cytosol | 23.02 | 27.67 |
| TraesCS1A01G304000.1 | Wheat | peroxisome | 26.11 | 27.49 |
| TraesCS6A01G159500.1 | Wheat | cytosol | 20.12 | 26.53 |
| TraesCS1A01G413800.1 | Wheat | cytosol, nucleus, plastid | 24.18 | 25.93 |
| TraesCS4A01G185900.1 | Wheat | cytosol | 22.05 | 25.56 |
| TraesCS2A01G096800.1 | Wheat | nucleus | 34.82 | 25.17 |
| TraesCS4A01G271000.1 | Wheat | cytosol | 29.59 | 24.68 |
| TraesCS7A01G382800.1 | Wheat | cytosol | 19.92 | 24.18 |
| TraesCS4A01G430600.1 | Wheat | plastid | 27.85 | 23.19 |
| TraesCS2A01G304000.1 | Wheat | cytosol, mitochondrion, nucleus | 21.47 | 23.12 |
| TraesCS5A01G135000.1 | Wheat | mitochondrion | 24.56 | 22.88 |
| TraesCS4A01G191300.1 | Wheat | cytosol | 27.27 | 22.85 |
| TraesCS7A01G059000.1 | Wheat | plastid | 27.27 | 22.49 |
| TraesCS5A01G144000.1 | Wheat | plastid | 27.66 | 22.07 |
| TraesCS4A01G260600.1 | Wheat | cytosol | 22.44 | 21.28 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G392500.1 | EnsemblPlantsGene:TraesCS3A01G392500 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF24 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | MapMan:26.9.2.3 | : |
Description
No Description!
Coordinates
chr3A:+:640391352..640392905
Molecular Weight (calculated)
55945.8 Da
IEP (calculated)
6.455
GRAVY (calculated)
-0.126
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGMARNPFP TSWQTQEGAS ICTNQELDYE HPHYLGIEEV ALDGVELELG PRAPKATKVD YLSSPYNASW PPAQADFESS RVRKTKQFRD VLETCKQKVE
101: AMEALEHSPP VSGGGFEEQA GEAVVAVGDV GGGGGGSGAD GMRLVQLLVA CAEAVACRDR AQAAALLREL QVGAPVHGTA FQRVASCFVQ GLADRLALAH
201: PPALGPASMA FSVPRSSCLD GARGEALAVA YELCPYLRFA HFVANASILE AFDGESNVHV VDLGMTMGLN RGHQWRALLD GLATRAGGKP ARVRVTGVGA
301: RVDTMRAVGR EIEAYAEELG MCLEFRAVDR TLESLHVDDL CIDAHEAVAI NSVLELHCVV KESRGALNSV LQTIRKLSPK AFVLVEQDAG HNGPFFLGRF
401: MEALHYYAAL FDALDAALPR YDARRARVEQ FHYGAEIRNV VGCEGAARVE RHERADQWRR RMSRAGFQSL PIKMAAKARE WLEEKAGGSG YTVAEEKGCL
501: VLGWKGKPVI AASCWKC
101: AMEALEHSPP VSGGGFEEQA GEAVVAVGDV GGGGGGSGAD GMRLVQLLVA CAEAVACRDR AQAAALLREL QVGAPVHGTA FQRVASCFVQ GLADRLALAH
201: PPALGPASMA FSVPRSSCLD GARGEALAVA YELCPYLRFA HFVANASILE AFDGESNVHV VDLGMTMGLN RGHQWRALLD GLATRAGGKP ARVRVTGVGA
301: RVDTMRAVGR EIEAYAEELG MCLEFRAVDR TLESLHVDDL CIDAHEAVAI NSVLELHCVV KESRGALNSV LQTIRKLSPK AFVLVEQDAG HNGPFFLGRF
401: MEALHYYAAL FDALDAALPR YDARRARVEQ FHYGAEIRNV VGCEGAARVE RHERADQWRR RMSRAGFQSL PIKMAAKARE WLEEKAGGSG YTVAEEKGCL
501: VLGWKGKPVI AASCWKC
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.