Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G314500.1 | Wheat | peroxisome | 90.02 | 95.88 |
| TraesCS1D01G303500.1 | Wheat | peroxisome | 94.5 | 95.08 |
| HORVU1Hr1G069140.1 | Barley | cytosol | 89.0 | 93.58 |
| Zm00001d038518_P001 | Maize | cytosol | 72.3 | 71.43 |
| EES18409 | Sorghum | cytosol | 71.28 | 70.99 |
| Os05t0485400-00 | Rice | peroxisome | 70.26 | 69.0 |
| VIT_07s0005g03700.t01 | Wine grape | cytosol | 40.12 | 40.45 |
| PGSC0003DMT400087504 | Potato | nucleus | 38.7 | 39.09 |
| Solyc09g066450.1.1 | Tomato | cytosol | 38.7 | 38.0 |
| KRH19587 | Soybean | cytosol | 38.49 | 35.93 |
| KRH32212 | Soybean | cytosol | 37.88 | 34.64 |
| TraesCS2A01G200700.1 | Wheat | cytosol | 31.36 | 34.22 |
| TraesCS6A01G159500.1 | Wheat | cytosol | 24.64 | 30.87 |
| TraesCS7A01G382800.1 | Wheat | cytosol | 25.25 | 29.11 |
| TraesCS2A01G532900.1 | Wheat | cytosol | 25.25 | 28.84 |
| TraesCS4A01G466700.1 | Wheat | cytosol, nucleus, peroxisome | 18.94 | 28.53 |
| TraesCS3A01G487500.1 | Wheat | cytosol, plastid | 25.66 | 28.19 |
| TraesCS4A01G191300.1 | Wheat | cytosol | 34.62 | 27.55 |
| TraesCS3A01G233000.1 | Wheat | plasma membrane | 26.68 | 26.15 |
| TraesCS3A01G392500.1 | Wheat | cytosol | 27.49 | 26.11 |
| TraesCS3A01G392600.1 | Wheat | cytosol | 25.25 | 25.94 |
| TraesCS3A01G392400.1 | Wheat | cytosol | 27.09 | 25.63 |
| TraesCS5A01G144000.1 | Wheat | plastid | 33.6 | 25.46 |
| TraesCS5A01G511900.1 | Wheat | cytosol | 22.0 | 24.77 |
| TraesCS2A01G304000.1 | Wheat | cytosol, mitochondrion, nucleus | 23.22 | 23.75 |
| TraesCS1A01G413800.1 | Wheat | cytosol, nucleus, plastid | 22.61 | 23.03 |
| TraesCS5A01G135000.1 | Wheat | mitochondrion | 25.05 | 22.16 |
| TraesCS4A01G260600.1 | Wheat | cytosol | 24.44 | 22.02 |
| TraesCS4A01G185900.1 | Wheat | cytosol | 19.55 | 21.52 |
| TraesCS4A01G430600.1 | Wheat | plastid | 26.27 | 20.77 |
| TraesCS7A01G059000.1 | Wheat | plastid | 26.27 | 20.57 |
| TraesCS4A01G271000.1 | Wheat | cytosol | 25.66 | 20.32 |
| TraesCS2A01G096800.1 | Wheat | nucleus | 29.33 | 20.14 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G304000.1 | EnsemblPlantsGene:TraesCS1A01G304000 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF22 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr1A:+:497345478..497346953
Molecular Weight (calculated)
51896.9 Da
IEP (calculated)
6.504
GRAVY (calculated)
0.006
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MINHLMSGRG SSVDMHDSSL GLMQFHDHHQ YMYGSSTGPF LPQHHGFIHP EEDRCTGKVV PGLAEPAAAG VAEEVEFDGC KEGGGDVAAV GQERQQHEDA
101: PKPGEEEKEA HGVRMIALLM ECAVAMSVGN LADANGTLLE LSQMASPYAP SCGERLVAYF ARAMAARLMS SWVGVCAPVH PSSASSWSGV HAAFRAFHNV
201: APFARCAYLA CNQAILDAFR GKRLVHVVDL DVVPGGALQW LPLLSALAAR PGGPPVLRVT GFGVSASALH DAGTQLAGLA TKLGMPFEFY AVAKRPGEVV
301: DAVADLPSRR PGEVVAVHWL RHALYDAAGD DVVTMRLLRW LEPKVVTLVE QERGPAGGDG GQFLDRFVAA LHHYSAVFDA LGAARPADGD ASRHMVENGV
401: LGREIGNVLA VAGPTRSGRE LFGSWQAELA RNGFLRAGAV GRAQVLAGAC PAGLGYTVAD DHDGTVRLGW KGTPLYAVST WTCCTTPHAR A
101: PKPGEEEKEA HGVRMIALLM ECAVAMSVGN LADANGTLLE LSQMASPYAP SCGERLVAYF ARAMAARLMS SWVGVCAPVH PSSASSWSGV HAAFRAFHNV
201: APFARCAYLA CNQAILDAFR GKRLVHVVDL DVVPGGALQW LPLLSALAAR PGGPPVLRVT GFGVSASALH DAGTQLAGLA TKLGMPFEFY AVAKRPGEVV
301: DAVADLPSRR PGEVVAVHWL RHALYDAAGD DVVTMRLLRW LEPKVVTLVE QERGPAGGDG GQFLDRFVAA LHHYSAVFDA LGAARPADGD ASRHMVENGV
401: LGREIGNVLA VAGPTRSGRE LFGSWQAELA RNGFLRAGAV GRAQVLAGAC PAGLGYTVAD DHDGTVRLGW KGTPLYAVST WTCCTTPHAR A
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.