Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G069140.1 | Barley | cytosol | 93.93 | 92.72 |
| TraesCS1D01G303500.1 | Wheat | peroxisome | 95.44 | 90.16 |
| TraesCS1A01G304000.1 | Wheat | peroxisome | 95.88 | 90.02 |
| EES18409 | Sorghum | cytosol | 74.62 | 69.78 |
| Zm00001d038518_P001 | Maize | cytosol | 73.75 | 68.41 |
| Os05t0485400-00 | Rice | peroxisome | 71.15 | 65.6 |
| VIT_07s0005g03700.t01 | Wine grape | cytosol | 40.78 | 38.6 |
| PGSC0003DMT400087504 | Potato | nucleus | 40.56 | 38.48 |
| Solyc09g066450.1.1 | Tomato | cytosol | 40.56 | 37.4 |
| KRH19587 | Soybean | cytosol | 40.13 | 35.17 |
| KRH32212 | Soybean | cytosol | 39.48 | 33.89 |
| TraesCS2B01G228000.1 | Wheat | cytosol | 32.75 | 33.63 |
| TraesCS6B01G191800.1 | Wheat | cytosol | 25.6 | 29.87 |
| TraesCS4B01G133000.1 | Wheat | cytosol, nucleus, plastid | 8.89 | 28.08 |
| TraesCS7B01G285500.1 | Wheat | cytosol | 25.81 | 27.74 |
| TraesCS3B01G535100.1 | Wheat | cytosol | 26.9 | 27.37 |
| TraesCS5B01G143100.1 | Wheat | plastid | 36.23 | 26.18 |
| TraesCS3B01G424500.1 | Wheat | cytosol | 28.63 | 25.53 |
| TraesCS3B01G424600.1 | Wheat | cytosol | 28.63 | 25.43 |
| TraesCS4B01G124000.1 | Wheat | plastid | 37.31 | 25.33 |
| TraesCS4B01G342800.1 | Wheat | cytosol | 23.64 | 24.77 |
| TraesCS3B01G262400.1 | Wheat | mitochondrion, plastid | 28.42 | 24.76 |
| TraesCS2B01G562400.1 | Wheat | cytosol | 25.16 | 24.47 |
| TraesCS2B01G320700.1 | Wheat | cytosol, mitochondrion, nucleus | 24.73 | 23.46 |
| TraesCS5B01G133800.1 | Wheat | mitochondrion | 27.33 | 22.83 |
| TraesCS4B01G054000.1 | Wheat | cytosol | 26.03 | 21.94 |
| TraesCS1B01G443800.1 | Wheat | cytosol | 23.43 | 20.89 |
| TraesCS4B01G043100.1 | Wheat | cytosol | 27.55 | 20.45 |
| TraesCS2B01G112100.1 | Wheat | nucleus | 31.24 | 20.14 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G314500.1 | EnsemblPlantsGene:TraesCS1B01G314500 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF22 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr1B:+:539460003..539461388
Molecular Weight (calculated)
48487.8 Da
IEP (calculated)
6.504
GRAVY (calculated)
0.068
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGSSTGPFL PQHHGFIHPG DDRCTGKVVP ALVEQATAGV AEEVEFDACK EGGGDVAVVG QERQQHDQDA PKPGEEEKEA QGVRMIALLM ECAVAMSVGN
101: LADANGTLLE LSQMASPYAP SCGERLVAYF ARAMAARLMS SWVGVCAPVH PSSASSWSGV HAAFRAFHNV APFARCAYLA CNQAILEAFR GKRLVHVVDL
201: DVVPGGALQW LSLLSALAAR PGGPPVLRVT GFGVSASALH DAGTQLAGLA TKLGMPFEFY AVAKRPGDVV DAVADLPSRR PGEVVAVHWL RHALYDAAGD
301: DVVTMRLVRW LEPKVVTLVE QERGPAGGDG GQFLDRFVAA LHHYSAVFDA LGAARPADGD ASRHLVENGV LGREIGNVLA VAGPTRSGRE MFGSWQVELA
401: RNGFLRAGAV GRAQVLAGAC PAGLGYTVAD DHDGTVRLGW KGTPLYAVST WTCCTTAHAR A
101: LADANGTLLE LSQMASPYAP SCGERLVAYF ARAMAARLMS SWVGVCAPVH PSSASSWSGV HAAFRAFHNV APFARCAYLA CNQAILEAFR GKRLVHVVDL
201: DVVPGGALQW LSLLSALAAR PGGPPVLRVT GFGVSASALH DAGTQLAGLA TKLGMPFEFY AVAKRPGDVV DAVADLPSRR PGEVVAVHWL RHALYDAAGD
301: DVVTMRLVRW LEPKVVTLVE QERGPAGGDG GQFLDRFVAA LHHYSAVFDA LGAARPADGD ASRHLVENGV LGREIGNVLA VAGPTRSGRE MFGSWQVELA
401: RNGFLRAGAV GRAQVLAGAC PAGLGYTVAD DHDGTVRLGW KGTPLYAVST WTCCTTAHAR A
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.