Factsheet for TraesCS7B01G285500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G382800.1	Wheat	cytosol	98.14	98.83
TraesCS7D01G379200.1	Wheat	cytosol	97.9	98.82
HORVU7Hr1G091000.1	Barley	cytosol	96.27	96.95
Os06t0610350-01	Rice	cytosol	82.98	80.73
Zm00001d046783_P001	Maize	mitochondrion	78.55	73.9
OQU76691	Sorghum	cytosol, extracellular	78.79	72.22
TraesCS6B01G191800.1	Wheat	cytosol	59.67	64.81
GSMUA_Achr1P09360_001	Banana	cytosol	43.59	50.68
GSMUA_AchrUn_...	Banana	cytosol	44.29	49.74
GSMUA_Achr1P19470_001	Banana	nucleus	44.06	49.35
GSMUA_Achr7P16880_001	Banana	cytosol	42.66	48.28
VIT_19s0015g01930.t01	Wine grape	cytosol	45.92	47.7
Solyc07g066250.1.1	Tomato	nucleus	41.96	42.06
PGSC0003DMT400057265	Potato	nucleus, plastid	42.19	42.0
CDY50028	Canola	nucleus, plastid	39.39	40.53
CDY54362	Canola	plastid	39.63	40.38
AT1G55580.1	Thale cress	plastid	39.86	38.43
Bra038002.1-P	Field mustard	nucleus, plastid	39.63	38.37
TraesCS3B01G535100.1	Wheat	cytosol	31.0	29.36
TraesCS2B01G228000.1	Wheat	cytosol	28.44	27.17
TraesCS4B01G342800.1	Wheat	cytosol	27.51	26.82
TraesCS1B01G314500.1	Wheat	peroxisome	27.74	25.81
TraesCS3B01G262400.1	Wheat	mitochondrion, plastid	29.6	24.01
TraesCS4B01G133000.1	Wheat	cytosol, nucleus, plastid	8.16	23.97
TraesCS1B01G443800.1	Wheat	cytosol	27.74	23.02
TraesCS4B01G054000.1	Wheat	cytosol	29.14	22.85
TraesCS2B01G320700.1	Wheat	cytosol, mitochondrion, nucleus	25.87	22.84
TraesCS2B01G562400.1	Wheat	cytosol	24.01	21.73
TraesCS5B01G143100.1	Wheat	plastid	30.54	20.53
TraesCS3B01G424600.1	Wheat	cytosol	24.71	20.42
TraesCS4B01G043100.1	Wheat	cytosol	29.14	20.13
TraesCS4B01G124000.1	Wheat	plastid	31.47	19.88
TraesCS3B01G424500.1	Wheat	cytosol	23.78	19.73
TraesCS5B01G133800.1	Wheat	mitochondrion	24.94	19.38
TraesCS2B01G112100.1	Wheat	nucleus	30.77	18.46

Protein Annotations

EnsemblPlants:TraesCS7B01G285500.1	EnsemblPlantsGene:TraesCS7B01G285500	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0010014	GO:GO:0010223	InterPro:IPR005202
InterPro:Scarecrow-like_18/MOC1	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF2	PFAM:PF03514	PFscan:PS50985
SEG:seg	MapMan:15.5.12	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:519784422..519785861

Molecular Weight (calculated)

45356.8 Da

IEP (calculated)

7.003

GRAVY (calculated)

-0.045

Length

429 amino acids

Sequence
(BLAST)

001: MIGSLHSSSS SDTDNNNNNN SNADLRNSSG EGEGDAALLG GGGRALAAAP STRDLVLACA DLLQRGDLAA ARRAAEILLS AGSPRGDATD RLAYHFARAL
101: VLRVDSKAGL PFSPRPPAGT APAPSGAYLA FNQIAPFLRF AHLTANQAIL EAVEGSRRVH ILDLDAAHGV QWPPLLQAIA ERADPALGPP EVRITGAGAD
201: RDTLLRTGNR LRAFARSIHL PFHFAPLLLS CAASTHHVAG TSTTPSTAVT SLELHPDETL AVNCVLFLHK LGGQDELAAF LKWVKAMAPA VVTVAEREAS
301: GGGIDPIDEL PRRVGVAMDH YSAVFEALEA TVPPGSRERL AVEQEVLGRE IEAAVGGTGG RWWRGLERWA TAARGTGFAA RPLSAFAVSQ ARLLLRLHYP
401: SEGYLVQESR GACFLGWQTR PLLSVSAWQ

Best Arabidopsis Sequence Match ( AT1G55580.1 )
(BLAST)

001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK

Arabidopsis Description

SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.