Factsheet for Os06t0610350-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G379200.1	Wheat	cytosol	80.95	84.0
TraesCS7A01G382800.1	Wheat	cytosol	80.95	83.8
HORVU7Hr1G091000.1	Barley	cytosol	80.27	83.1
TraesCS7B01G285500.1	Wheat	cytosol	80.73	82.98
Zm00001d046783_P001	Maize	mitochondrion	78.0	75.44
OQU76691	Sorghum	cytosol, extracellular	77.1	72.65
Os02t0197300-00	Rice	cytosol	58.73	58.07
GSMUA_Achr1P09360_001	Banana	cytosol	41.72	49.86
GSMUA_Achr1P19470_001	Banana	nucleus	43.08	49.61
GSMUA_AchrUn_...	Banana	cytosol	42.63	49.21
GSMUA_Achr7P16880_001	Banana	cytosol	41.5	48.28
VIT_19s0015g01930.t01	Wine grape	cytosol	43.08	46.0
Solyc07g066250.1.1	Tomato	nucleus	40.14	41.36
PGSC0003DMT400057265	Potato	nucleus, plastid	40.36	41.3
CDY50028	Canola	nucleus, plastid	37.41	39.57
CDY54362	Canola	plastid	37.41	39.19
AT1G55580.1	Thale cress	plastid	37.87	37.53
Bra038002.1-P	Field mustard	nucleus, plastid	37.41	37.25
Os01t0948200-00	Rice	cytosol	29.48	29.41
Os07t0567700-02	Rice	cytosol	30.16	29.1
Os06t0211500-00	Rice	cytosol	11.34	26.18
Os05t0485400-00	Rice	peroxisome	28.57	25.2
Os01t0646300-01	Rice	cytosol	28.12	25.05
Os04t0432100-00	Rice	nucleus	27.21	23.81
Os05t0574900-01	Rice	plasma membrane	26.08	23.0
Os03t0723000-01	Rice	nucleus	29.48	22.49
Os12t0138100-00	Rice	cytosol	24.04	21.54
Os11t0141500-00	Rice	cytosol	24.04	21.54
Os12t0138200-00	Rice	cytosol	24.04	20.78
Os11t0141700-00	Rice	cytosol	23.58	20.55
Os03t0707600-01	Rice	nucleus	28.34	20.0
Os11t0124300-01	Rice	nucleus, plastid	29.48	19.97
Os12t0122000-01	Rice	plastid	29.48	19.7
Os06t0127800-01	Rice	plastid	26.53	18.96
Os05t0378200-00	Rice	cytosol	22.9	18.33
Os05t0378500-00	Rice	plastid	21.09	16.61
Os11t0141550-01	Rice	cytosol	0.45	1.55
Os12t0138166-00	Rice	endoplasmic reticulum, extracellular	1.13	1.42

Protein Annotations

EntrezGene:107278653	MapMan:15.5.12	ProteinID:AAP13049.1	ProteinID:BAD35485.1	ProteinID:BAS98577.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009987	GO:GO:0010014
GO:GO:0010223	GO:GO:0043565	InterPro:IPR005202	EnsemblPlantsGene:Os06g0610350	EnsemblPlants:Os06t0610350-01	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF2	UniProt:Q84MM9	InterPro:Scarecrow-like_18/MOC1	InterPro:TF_GRAS
UniParc:UPI0000190A9C	RefSeq:XP_015642672.1	SEG:seg	:	:	:

Description

MONOCULM 1, monoculm1, Monoculm 1, Protein MONOCULM 1GRAS family nuclear protein, Control of tillering (Os06t0610350-01)

Coordinates

chr6:+:24313523..24316697

Molecular Weight (calculated)

45752.2 Da

IEP (calculated)

7.299

GRAVY (calculated)

0.019

Length

441 amino acids

Sequence
(BLAST)

001: MLRSLHSSSS SDTDNNSGGC KNNGGGGGEA AAAVEGGGDQ RAVAAAAPST RDLLLACADL LQRGDLPAAR RAAEIVLAAA ASPRGDAADR LAYHFARALA
101: LRVDAKAGHG HVVVGGGAAR PASSGAYLAF NQIAPFLRFA HLTANQAILE AVDGARRVHI LDLDAVHGVQ WPPLLQAIAE RADPALGPPE VRVTGAGADR
201: DTLLRTGNRL RAFARSIHLP FHFTPLLLSC ATTAPHHVAG TSTGAAAAAS TAAAATGLEF HPDETLAVNC VMFLHNLAGH DELAAFLKWV KAMSPAVVTI
301: AEREAGGGGG GGDHIDDLPR RVGVAMDHYS AVFEALEATV PPGSRERLAV EQEVLGREIE AAVGPSGGRW WRGIERWGGA ARAAGFAARP LSAFAVSQAR
401: LLLRLHYPSE GYLVQEARGA CFLGWQTRPL LSVSAWQPSS S

Best Arabidopsis Sequence Match ( AT1G55580.1 )
(BLAST)

001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK

Arabidopsis Description

SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.